RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 GPN2Q9H9Y4 310 aaPredicted RBP10.44□□□□□ -0.74
TNFAIP3-208ENST00000615468 RPRD1BQ9NQG5 326 aaKnown RBP10.44□□□□□ -0.74
TNFAIP3-208ENST00000615468 CISHQ9NSE2 258 aa10.44□□□□□ -0.74
TNFAIP3-208ENST00000615468 VTI1BQ9UEU0 232 aa10.44□□□□□ -0.74
TNFAIP3-208ENST00000615468 LAMB1P07942 1786 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 LINC00854A0A1B0GVQ3 168 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 NR5A2O00482 541 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 HOXC11O43248 304 aaPredicted RBP10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 GRID2O43424 1007 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 NRP2O60462 931 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 APOA1P02647 267 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 MTHFD1P11586 935 aaKnown RBP10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 CAPRIN1Q14444 709 aaKnown RBP10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 FAM214AQ32MH5 1076 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 FUT11Q495W5 492 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 JADE1Q6IE81 842 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 SLC39A4Q6P5W5 647 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 FAM35AQ86V20 835 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 CCNYQ8ND76 341 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 AGBL3Q8NEM8 1001 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 URGCPQ8TCY9 931 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 ATL1Q8WXF7 558 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 GMCL1Q96IK5 515 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 CPB2Q96IY4 423 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 ZBTB45Q96K62 511 aaPredicted RBP10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 ZNF560Q96MR9 790 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 RNF157Q96PX1 679 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 CYP4F12Q9HCS2 524 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 DPP3Q9NY33 737 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 MOCS1Q9NZB8 636 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 SCN9AQ15858 1988 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 ZNF541Q9H0D2 1346 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 TRPC5OSA6NMA1 111 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 ABCB7O75027 752 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 VNN1O95497 513 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 ABCB1P08183 1280 aaPredicted RBP10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 PSMB9P28065 219 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 NOVP48745 357 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 ACTR2P61160 394 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 IL1RL1Q01638 556 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 POU5F1BQ06416 359 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 PPP1R3AQ16821 1122 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 RAB6CQ53S08 254 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 CATSPER4Q7RTX7 472 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 ERO1BQ86YB8 467 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 GALNT13Q8IUC8 556 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 PQLC3Q8N755 202 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 IL31RAQ8NI17 732 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 TFAP2BQ92481 460 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 NACC2Q96BF6 587 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 RNF145Q96MT1 663 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 GMLQ99445 158 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 MSTO1Q9BUK6 570 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 SEZ6LQ9BYH1 1024 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 RAB6CQ9H0N0 254 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 DDX60LQ5H9U9 1706 aaKnown RBP10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 CNTNAP1P78357 1384 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 LRRIQ4A6NIV6 560 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 SLCO1B7G3V0H7 640 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 H0Y626 953 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 GPR25O00155 361 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 PARNO95453 639 aaKnown RBP10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 LSM8O95777 96 aaKnown RBP10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 CAPNS1P04632 268 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 WNT7BP56706 349 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 CCNA1P78396 465 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 TFAMQ00059 246 aaKnown RBP10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 USP10Q14694 798 aaKnown RBP10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 INTS11Q5TA45 600 aaKnown RBP10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 FSTL4Q6MZW2 842 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 TAF2Q6P1X5 1199 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 FKBP9P1Q75LS8 142 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 LINC00523Q86TU6 105 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 RNF135Q8IUD6 432 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 GRAMD2AQ8IUY3 354 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 CDKL3Q8IVW4 592 aaPredicted RBP10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 COLGALT2Q8IYK4 626 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 AFAP1L2Q8N4X5 818 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 SLC16A10Q8TF71 515 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 ZNF717Q9BY31 904 aaPredicted RBP10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 TESMINQ9Y4I5 508 aa10.43□□□□□ -0.74
TNFAIP3-208ENST00000615468 PTPRJQ12913 1337 aa10.42□□□□□ -0.74
TNFAIP3-208ENST00000615468 G3V2L1 256 aa10.42□□□□□ -0.74
TNFAIP3-208ENST00000615468 EXTL3O43909 919 aa10.42□□□□□ -0.74
TNFAIP3-208ENST00000615468 SEC14L2O76054 403 aa10.42□□□□□ -0.74
TNFAIP3-208ENST00000615468 INMTO95050 263 aa10.42□□□□□ -0.74
TNFAIP3-208ENST00000615468 C4BPAP04003 597 aaKnown RBP10.42□□□□□ -0.74
TNFAIP3-208ENST00000615468 PCNAP12004 261 aa10.42□□□□□ -0.74
TNFAIP3-208ENST00000615468 NCK1P16333 377 aa10.42□□□□□ -0.74
TNFAIP3-208ENST00000615468 YWHAEP62258 255 aaKnown RBP10.42□□□□□ -0.74
TNFAIP3-208ENST00000615468 TUBA3CQ13748 450 aa10.42□□□□□ -0.74
TNFAIP3-208ENST00000615468 COLEC12Q5KU26 742 aa10.42□□□□□ -0.74
TNFAIP3-208ENST00000615468 LIPMQ5VYY2 423 aa10.42□□□□□ -0.74
TNFAIP3-208ENST00000615468 GALNT12Q8IXK2 581 aa10.42□□□□□ -0.74
TNFAIP3-208ENST00000615468 MICU2Q8IYU8 434 aa10.42□□□□□ -0.74
TNFAIP3-208ENST00000615468 CADM2Q8N3J6 435 aa10.42□□□□□ -0.74
TNFAIP3-208ENST00000615468 ZNF280CQ8ND82 737 aa10.42□□□□□ -0.74
TNFAIP3-208ENST00000615468 MCUQ8NE86 351 aa10.42□□□□□ -0.74
TNFAIP3-208ENST00000615468 GMCL1P1Q8NEA9 526 aa10.42□□□□□ -0.74
TNFAIP3-208ENST00000615468 CMASQ8NFW8 434 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms