RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 HDDC3Q8N4P3 179 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 SLC25A41Q8N5S1 370 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 DNAAF3Q8N9W5 541 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 LPCAT1Q8NF37 534 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 GANCQ8TET4 914 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 PIH1D2Q8WWB5 315 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 RAB7BQ96AH8 199 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 ARRDC3Q96B67 414 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 HHIPQ96QV1 700 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 SRPK1Q96SB4 655 aaKnown RBP14.8□□□□□ -0.04
CD48-203ENST00000613788 HINFPQ9BQA5 517 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 APOL2Q9BQE5 337 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 FRMD8Q9BZ67 464 aaPredicted RBP14.8□□□□□ -0.04
CD48-203ENST00000613788 SLC6A17Q9H1V8 727 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 FBXL12Q9NXK8 326 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 SHOC2Q9UQ13 582 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 PPIL1Q9Y3C6 166 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 CKAP5Q14008 2032 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 NCOR1O75376 2440 aa14.8□□□□□ -0.04
CD48-203ENST00000613788 TCRBV7S3A2A0A539 114 aa14.79□□□□□ -0.04
CD48-203ENST00000613788 UPK3BL1B0FP48 263 aa14.79□□□□□ -0.04
CD48-203ENST00000613788 BHMG1C9JSJ3 638 aaPredicted RBP14.79□□□□□ -0.04
CD48-203ENST00000613788 UPK3BL2E5RIL1 263 aa14.79□□□□□ -0.04
CD48-203ENST00000613788 RNASEH2AO75792 299 aaKnown RBP14.79□□□□□ -0.04
CD48-203ENST00000613788 MLNP12872 115 aa14.79□□□□□ -0.04
CD48-203ENST00000613788 TIMP2P16035 220 aa14.79□□□□□ -0.04
CD48-203ENST00000613788 GALNT3Q14435 633 aa14.79□□□□□ -0.04
CD48-203ENST00000613788 SIRPB2Q5JXA9 342 aa14.79□□□□□ -0.04
CD48-203ENST00000613788 ANKRD22Q5VYY1 191 aa14.79□□□□□ -0.04
CD48-203ENST00000613788 ERAP2Q6P179 960 aa14.79□□□□□ -0.04
CD48-203ENST00000613788 USP45Q70EL2 814 aa14.79□□□□□ -0.04
CD48-203ENST00000613788 PARS2Q7L3T8 475 aaKnown RBP14.79□□□□□ -0.04
CD48-203ENST00000613788 RASSF3Q86WH2 238 aa14.79□□□□□ -0.04
CD48-203ENST00000613788 CACUL1Q86Y37 369 aa14.79□□□□□ -0.04
CD48-203ENST00000613788 FAM129AQ9BZQ8 928 aa14.79□□□□□ -0.04
CD48-203ENST00000613788 XAB2Q9HCS7 855 aaKnown RBP14.79□□□□□ -0.04
CD48-203ENST00000613788 CASS4Q9NQ75 786 aa14.79□□□□□ -0.04
CD48-203ENST00000613788 ITM2CQ9NQX7 267 aa14.79□□□□□ -0.04
CD48-203ENST00000613788 GRHL1Q9NZI5 618 aa14.79□□□□□ -0.04
CD48-203ENST00000613788 EBF1Q9UH73 591 aa14.79□□□□□ -0.04
CD48-203ENST00000613788 A0A0J9YYE9 177 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 A0A1W2PP55 124 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 ESYT3A0FGR9 886 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 LAMTOR5O43504 91 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 ZNF217O75362 1048 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 TRBC1P01850 177 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 ATXN1LP0C7T5 689 aaKnown RBP14.78□□□□□ -0.04
CD48-203ENST00000613788 ADRB3P13945 408 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 DRD3P35462 400 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 P2RY2P41231 377 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 CHRNA4P43681 627 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 METAP1P53582 386 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 ELP6Q0PNE2 266 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 CNTN1Q12860 1018 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 OLIG2Q13516 323 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 CUL1Q13616 776 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 QPCTQ16769 361 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 DENND5AQ6IQ26 1287 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 LRRC8BQ6P9F7 803 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.78□□□□□ -0.04
CD48-203ENST00000613788 ZSWIM9Q86XI8 627 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 AADATQ8N5Z0 425 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 TMEM105Q8N8V8 129 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 MDGA1Q8NFP4 955 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 OR52K1Q8NGK4 314 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 RUBCNQ92622 972 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 ART4Q93070 314 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 SCRN2Q96FV2 425 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 GDF3Q9NR23 364 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 FZD4Q9ULV1 537 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 BDP1A6H8Y1 2624 aa14.78□□□□□ -0.04
CD48-203ENST00000613788 GOLGA8MH3BSY2 632 aa14.77□□□□□ -0.04
CD48-203ENST00000613788 SLC7A4O43246 635 aa14.77□□□□□ -0.04
CD48-203ENST00000613788 TMEM63AO94886 807 aa14.77□□□□□ -0.04
CD48-203ENST00000613788 CYP2A6P11509 494 aaPredicted RBP14.77□□□□□ -0.04
CD48-203ENST00000613788 HOXA6P31267 233 aa14.77□□□□□ -0.04
CD48-203ENST00000613788 GRIA1P42261 906 aa14.77□□□□□ -0.04
CD48-203ENST00000613788 NPY2RP49146 381 aa14.77□□□□□ -0.04
CD48-203ENST00000613788 PLTPP55058 493 aa14.77□□□□□ -0.04
CD48-203ENST00000613788 FAM193AP78312 1265 aa14.77□□□□□ -0.04
CD48-203ENST00000613788 TRADDQ15628 312 aa14.77□□□□□ -0.04
CD48-203ENST00000613788 C1orf210Q8IVY1 113 aa14.77□□□□□ -0.04
CD48-203ENST00000613788 DTWD2Q8NBA8 298 aa14.77□□□□□ -0.04
CD48-203ENST00000613788 IFT81Q8WYA0 676 aa14.77□□□□□ -0.04
CD48-203ENST00000613788 NEUROG2Q9H2A3 272 aa14.77□□□□□ -0.04
CD48-203ENST00000613788 TRABDQ9H4I3 376 aa14.77□□□□□ -0.04
CD48-203ENST00000613788 MAGEE1Q9HCI5 957 aa14.77□□□□□ -0.04
CD48-203ENST00000613788 BFARQ9NZS9 450 aa14.77□□□□□ -0.04
CD48-203ENST00000613788 HACD3Q9P035 362 aa14.77□□□□□ -0.04
CD48-203ENST00000613788 MUC3AQ02505 3323 aa14.77□□□□□ -0.05
CD48-203ENST00000613788 K7ESF4 209 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 NEMP1O14524 444 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 TP73O15350 636 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 AP1G1O43747 822 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 CTPS1P17812 591 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 AVPR2P30518 371 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 OXTRP30559 389 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 HNF1BP35680 557 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 TPMTP51580 245 aa14.76□□□□□ -0.05
CD48-203ENST00000613788 HLTFQ14527 1009 aaKnown RBP eCLIP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms