RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 MEIOBQ8N635 442 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 ANKRD42Q8N9B4 389 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 BANPQ8N9N5 519 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 VN1R2Q8NFZ6 395 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 ATXN2LQ8WWM7 1075 aaKnown RBP8.99□□□□□ -0.97
CCDC47-207ENST00000612558 MRPL38Q96DV4 380 aaKnown RBP8.99□□□□□ -0.97
CCDC47-207ENST00000612558 SERAC1Q96JX3 654 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 LMLNQ96KR4 655 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 ZNF778Q96MU6 729 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 BBS2Q9BXC9 721 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 EPN3Q9H201 632 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 LINC00597Q9H2U6 94 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 SPHK2Q9NRA0 654 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 TREX1Q9NSU2 369 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 ABCB8Q9NUT2 735 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 NSMCE4AQ9NXX6 385 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 MAP10Q9P2G4 905 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 LHX3Q9UBR4 397 aa8.99□□□□□ -0.97
CCDC47-207ENST00000612558 GMNCA6NCL1 334 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 MROH6A6NGR9 719 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 NEDD8-MDP1E9PL57 170 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 ZWINTO95229 277 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 MT-CO1P00395 513 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 CA4P22748 312 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 HLA-FP30511 346 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 CD70P32970 193 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 BMP8BP34820 402 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 SPRP35270 261 aaPredicted RBP8.98□□□□□ -0.97
CCDC47-207ENST00000612558 SLC18A2Q05940 514 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 SEPT6Q14141 434 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.98□□□□□ -0.974e-12■■■□□ 17
CCDC47-207ENST00000612558 TSTD2Q5T7W7 516 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 MROH9Q5TGP6 573 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 KIAA0930Q6ICG6 404 aaPredicted RBP8.98□□□□□ -0.97
CCDC47-207ENST00000612558 NCEH1Q6PIU2 408 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 TMEM184AQ6ZMB5 413 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 MGARPQ8TDB4 240 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 BRSK1Q8TDC3 778 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 DENND1AQ8TEH3 1009 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 PEX13Q92968 403 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 TIFAQ96CG3 184 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 EXOC2Q96KP1 924 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 TRIB3Q96RU7 358 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 TDRD1Q9BXT4 1180 aaKnown RBP8.98□□□□□ -0.97
CCDC47-207ENST00000612558 IGFLR1Q9H665 355 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 CCDC134Q9H6E4 229 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 IARS2Q9NSE4 1012 aaKnown RBP8.98□□□□□ -0.97
CCDC47-207ENST00000612558 IL1RAPL1Q9NZN1 696 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 MARK1Q9P0L2 795 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 PSAT1Q9Y617 370 aa8.98□□□□□ -0.97
CCDC47-207ENST00000612558 LAMA3Q16787 3333 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 TRANK1O15050 2925 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 CCDC78A2IDD5 438 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 HMX2A2RU54 273 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 GOLGA8RI6L899 631 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 RFXAPO00287 272 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 TM9SF1O15321 606 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 RFPL1O75677 317 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 VAPBO95292 243 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 ITGA2BP08514 1039 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 TYRP14679 529 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 FSHRP23945 695 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 RPA3P35244 121 aaPredicted RBP8.97□□□□□ -0.97
CCDC47-207ENST00000612558 ARCN1P48444 511 aaKnown RBP8.97□□□□□ -0.97
CCDC47-207ENST00000612558 CSNK1DP48730 415 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 CSE1LP55060 971 aaKnown RBP8.97□□□□□ -0.97
CCDC47-207ENST00000612558 AP1S1P61966 158 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 IL9RQ01113 521 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 BMPR2Q13873 1038 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 GALNT3Q14435 633 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 DMC1Q14565 340 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 LRRC14Q15048 493 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 CNGA3Q16281 694 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 PITRM1Q5JRX3 1037 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 LY6G5CQ5SRR4 150 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 RARS2Q5T160 578 aaKnown RBP8.97□□□□□ -0.97
CCDC47-207ENST00000612558 STRA8Q7Z7C7 330 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 GPR149Q86SP6 731 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 SRLQ86TD4 932 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 RNF135Q8IUD6 432 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 CNTN4Q8IWV2 1026 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 GABPB2Q8TAK5 448 aaPredicted RBP8.97□□□□□ -0.97
CCDC47-207ENST00000612558 ACMSDQ8TDX5 336 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 DYDC1Q8WWB3 177 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 RMDN1Q96DB5 314 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 NSMCE3Q96MG7 304 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 AGAP2Q99490 1192 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 KLF6Q99612 283 aaPredicted RBP8.97□□□□□ -0.97
CCDC47-207ENST00000612558 RBBP8Q99708 897 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 ADGRE3Q9BY15 652 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 SLC2A11Q9BYW1 496 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 SLC17A6Q9P2U8 582 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 SLC2A6Q9UGQ3 507 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 INTS6Q9UL03 887 aaKnown RBP8.97□□□□□ -0.97
CCDC47-207ENST00000612558 RIMKLBQ9ULI2 386 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 CHKBQ9Y259 395 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 PCDHGC4Q9Y5F7 938 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 RAI2Q9Y5P3 530 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 WNT6Q9Y6F9 365 aa8.97□□□□□ -0.97
CCDC47-207ENST00000612558 NUP210Q8TEM1 1887 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms