RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 TECRLQ5HYJ1 363 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 FBXW8Q8N3Y1 598 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 TTC16Q8NEE8 873 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 OR7D4Q8NG98 312 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 TMA16Q96EY4 203 aaKnown RBP14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 TRIM62Q9BVG3 475 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 UBE2OQ9C0C9 1292 aaKnown RBP14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 NSMCE4AQ9NXX6 385 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 CDYLQ9Y232 598 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 LRCH1Q9Y2L9 728 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 FRMPD3Q5JV73 1810 aa14.17□□□□□ -0.14
PCDHGA3-202ENST00000612467 UBFD1O14562 309 aaKnown RBP14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 ATP5BP06576 529 aaKnown RBP14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 MYL4P12829 197 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 BMP1P13497 986 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 PAMP19021 973 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 RGRP47804 291 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 BTKQ06187 659 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 SREBF2Q12772 1141 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 RNF220Q5VTB9 566 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 DBF4BQ8NFT6 615 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 BCL7CQ8WUZ0 217 aaPredicted RBP14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 BATF3Q9NR55 127 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 TMEM248Q9NWD8 314 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 HEATR9A2RTY3 570 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 MTMR11A4FU01 709 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 C9JVG2 144 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 SDHDO14521 159 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 LDB2O43679 373 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 RAMP2O60895 175 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 SKIP12755 728 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 SLC6A4P31645 630 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 INHBEP58166 350 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 PRAMEP78395 509 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 MS4A2Q01362 244 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 FAM26DQ5JW98 314 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 TMCO4Q5TGY1 634 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 DHDDSQ86SQ9 333 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 CILP2Q8IUL8 1156 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 PCDH20Q8N6Y1 951 aaKnown RBP14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 HMGCLL1Q8TB92 370 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 ECSITQ9BQ95 431 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 FBRSL1Q9HCM7 1045 aaKnown RBP14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 ATP13A1Q9HD20 1204 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 MARCH5Q9NX47 278 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 NCKIPSDQ9NZQ3 722 aa14.16□□□□□ -0.14
PCDHGA3-202ENST00000612467 H3BNX3 289 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 KIF1CO43896 1103 aaKnown RBP14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 SIX3O95343 332 aaPredicted RBP14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 APOA4P06727 396 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 CRABP2P29373 138 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 SLC11A1P49279 550 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 AQP4P55087 323 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 MTTPP55157 894 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 NME5P56597 212 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 RPS24P62847 133 aaKnown RBP14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 CEACAM7Q14002 265 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 ZNF549Q6P9A3 640 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 ACAD11Q709F0 780 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 OR9I1Q8NGQ6 314 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 RDH11Q8TC12 318 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 PTERQ96BW5 349 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 C8orf48Q96LL4 319 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 C1orf74Q96LT6 269 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 MRPL57Q9BQC6 102 aaKnown RBP14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 RTKNQ9BST9 563 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 FAM96AQ9H5X1 160 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 VPS45Q9NRW7 570 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 CLIC5Q9NZA1 410 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 GMPR2Q9P2T1 348 aaKnown RBP14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 THSD7BQ9C0I4 1608 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 AP3B1O00203 1094 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 GJB5O95377 273 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 S1PR4O95977 384 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 SP100P23497 879 aaPredicted RBP14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 PPARGP37231 505 aaPredicted RBP14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 HADHAP40939 763 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 SGSHP51688 502 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 MRPS22P82650 360 aaKnown RBP14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 CYLC2Q14093 348 aaPredicted RBP14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 GPNMBQ14956 572 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 TRIP10Q15642 601 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 NFE2Q16621 373 aaPredicted RBP14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 MSANTD2Q6P1R3 559 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 LGI2Q8N0V4 545 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 PCSK9Q8NBP7 692 aaKnown RBP14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 GLT1D1Q96MS3 346 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 SPON2Q9BUD6 331 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 FBXO44Q9H4M3 255 aa14.15□□□□□ -0.14
PCDHGA3-202ENST00000612467 RGSL1A5PLK6 1076 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 TLR5O60602 858 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 NBNO60934 754 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 GOT2P00505 430 aaKnown RBP14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 POU4F1Q01851 419 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 DSG1Q02413 1049 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 LBRQ14739 615 aaKnown RBP14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 LAYNQ6UX15 382 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 RNF180Q86T96 592 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 GDPD5Q8WTR4 605 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 BTN2A3PQ96KV6 586 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms