RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 CEP44Q9C0F1 390 aa12.38□□□□□ -0.43
CBWD1-220ENST00000612045 ZFP14Q9HCL3 533 aa12.38□□□□□ -0.43
CBWD1-220ENST00000612045 THG1LQ9NWX6 298 aaKnown RBP12.38□□□□□ -0.43
CBWD1-220ENST00000612045 NSMCE4AQ9NXX6 385 aa12.38□□□□□ -0.43
CBWD1-220ENST00000612045 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.38□□□□□ -0.43
CBWD1-220ENST00000612045 SLCO3A1Q9UIG8 710 aa12.38□□□□□ -0.43
CBWD1-220ENST00000612045 KCTD3Q9Y597 815 aa12.38□□□□□ -0.43
CBWD1-220ENST00000612045 SPO11Q9Y5K1 396 aa12.38□□□□□ -0.43
CBWD1-220ENST00000612045 ARL5AQ9Y689 179 aa12.38□□□□□ -0.43
CBWD1-220ENST00000612045 SIN3BO75182 1162 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 CRTAMO95727 393 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 F7P08709 466 aaPredicted RBP12.37□□□□□ -0.43
CBWD1-220ENST00000612045 RPA3P35244 121 aaPredicted RBP12.37□□□□□ -0.43
CBWD1-220ENST00000612045 SPRP35270 261 aaPredicted RBP12.37□□□□□ -0.43
CBWD1-220ENST00000612045 DGKGP49619 791 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 CSE1LP55060 971 aaKnown RBP12.37□□□□□ -0.43
CBWD1-220ENST00000612045 SNRPD1P62314 119 aaKnown RBP12.37□□□□□ -0.43
CBWD1-220ENST00000612045 BCL2L1Q07817 233 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 DNAJC3Q13217 504 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 THOC5Q13769 683 aaKnown RBP12.37□□□□□ -0.43
CBWD1-220ENST00000612045 QPCTQ16769 361 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 CTC1Q2NKJ3 1217 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 C22orf39Q6P5X5 142 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 VITQ6UXI7 678 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 C12orf40Q86WS4 652 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 DENND1AQ8TEH3 1009 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 PTPRN2Q92932 1015 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 PEX13Q92968 403 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 E2F7Q96AV8 911 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 MYADMQ96S97 322 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 MCMBPQ9BTE3 642 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 ATP13A3Q9H7F0 1226 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 MLXIPLQ9NP71 852 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 RIMKLBQ9ULI2 386 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 PCDHB9Q9Y5E1 797 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 OTOL1A6NHN0 477 aaPredicted RBP12.37□□□□□ -0.43
CBWD1-220ENST00000612045 TRAFD1O14545 582 aaPredicted RBP12.37□□□□□ -0.43
CBWD1-220ENST00000612045 HTRA2O43464 458 aaPredicted RBP12.37□□□□□ -0.43
CBWD1-220ENST00000612045 ABCB7O75027 752 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 SOCS5O75159 536 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 TULP3O75386 442 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 PGLSO95336 258 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 PIGNO95427 931 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 GSRP00390 522 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 GKP32189 559 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 SLC8A1P32418 973 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 ARSDP51689 593 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 LIMK2P53671 638 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 ACVR1Q04771 509 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 FCHO2Q0JRZ9 810 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 LRRC14Q15048 493 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 PDGFRLQ15198 375 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 DLG2Q15700 870 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 ACCSLQ4AC99 568 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 ARMC12Q5T9G4 340 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 NEPROQ6NW34 567 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 GLT6D1Q7Z4J2 308 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 MFSD6LQ8IWD5 586 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 DENND6AQ8IWF6 608 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 ETFBKMTQ8IXQ9 262 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 RYBPQ8N488 228 aaPredicted RBP12.37□□□□□ -0.43
CBWD1-220ENST00000612045 PCDH20Q8N6Y1 951 aaKnown RBP12.37□□□□□ -0.43
CBWD1-220ENST00000612045 MDGA1Q8NFP4 955 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 STYXQ8WUJ0 223 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 MYLIPQ8WY64 445 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 HDAC10Q969S8 669 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 MYO19Q96H55 970 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 SGSM3Q96HU1 749 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 DNAJC1Q96KC8 554 aaKnown RBP12.37□□□□□ -0.43
CBWD1-220ENST00000612045 RIPOR3Q96MK2 946 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 SMIM14Q96QK8 99 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 FAM167BQ9BTA0 163 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 ECT2Q9H8V3 914 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 HPS4Q9NQG7 708 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 CLDND1Q9NY35 253 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 HECAQ9UBI9 543 aaPredicted RBP12.37□□□□□ -0.43
CBWD1-220ENST00000612045 GGT7Q9UJ14 662 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 ERVW-1Q9UQF0 538 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 SLC27A6Q9Y2P4 619 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 MTCH2Q9Y6C9 303 aa12.37□□□□□ -0.43
CBWD1-220ENST00000612045 CCL22O00626 93 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 AURKAO14965 403 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 SLC7A4O43246 635 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 TIMM44O43615 452 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 BUD23O43709 281 aaKnown RBP12.36□□□□□ -0.43
CBWD1-220ENST00000612045 ZWINTO95229 277 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 AHSGP02765 367 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 ALDOAP04075 364 aaKnown RBP12.36□□□□□ -0.43
CBWD1-220ENST00000612045 GABRB3P28472 473 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 LTBRP36941 435 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 CCNFP41002 786 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 SLC1A2P43004 574 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 PDE1BQ01064 536 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 CTBP1Q13363 440 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 PTPRCAPQ14761 206 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 TAF1AQ15573 450 aaPredicted RBP12.36□□□□□ -0.43
CBWD1-220ENST00000612045 UGP2Q16851 508 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 GAB4Q2WGN9 574 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 MYLK3Q32MK0 819 aa12.36□□□□□ -0.43
CBWD1-220ENST00000612045 ZNF470Q6ECI4 717 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms