RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 PHF19Q5T6S3 580 aa13.9□□□□□ -0.18
LINC00116-203ENST00000611969 TAF3Q5VWG9 929 aa13.9□□□□□ -0.18
LINC00116-203ENST00000611969 SPRED1Q7Z699 444 aa13.9□□□□□ -0.18
LINC00116-203ENST00000611969 NOP9Q86U38 636 aaKnown RBP13.9□□□□□ -0.18
LINC00116-203ENST00000611969 EPS8L1Q8TE68 723 aa13.9□□□□□ -0.18
LINC00116-203ENST00000611969 EPAS1Q99814 870 aa13.9□□□□□ -0.18
LINC00116-203ENST00000611969 SPON2Q9BUD6 331 aa13.9□□□□□ -0.18
LINC00116-203ENST00000611969 EDEM3Q9BZQ6 932 aa13.9□□□□□ -0.18
LINC00116-203ENST00000611969 NAT10Q9H0A0 1025 aaKnown RBP13.9□□□□□ -0.18
LINC00116-203ENST00000611969 TKTL2Q9H0I9 626 aa13.9□□□□□ -0.18
LINC00116-203ENST00000611969 GANQ9H2C0 597 aa13.9□□□□□ -0.18
LINC00116-203ENST00000611969 SEMA6CQ9H3T2 930 aa13.9□□□□□ -0.18
LINC00116-203ENST00000611969 RETREG1Q9H6L5 497 aa13.9□□□□□ -0.18
LINC00116-203ENST00000611969 ZNF71Q9NQZ8 489 aaPredicted RBP13.9□□□□□ -0.18
LINC00116-203ENST00000611969 KCNK4Q9NYG8 393 aa13.9□□□□□ -0.18
LINC00116-203ENST00000611969 ZNF212Q9UDV6 495 aa13.9□□□□□ -0.18
LINC00116-203ENST00000611969 LIMA1Q9UHB6 759 aaKnown RBP13.9□□□□□ -0.18
LINC00116-203ENST00000611969 DRGXA6NNA5 263 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 AREL1O15033 823 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 MMP20O60882 483 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 CD160O95971 181 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 CYP1A1P04798 512 aaPredicted RBP13.89□□□□□ -0.19
LINC00116-203ENST00000611969 MMEP08473 750 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 ALPIP09923 528 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 CCL4P13236 92 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 ITIH2P19823 946 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 SOX5P35711 763 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 SULT1E1P49888 294 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 COPB1P53618 953 aaKnown RBP13.89□□□□□ -0.19
LINC00116-203ENST00000611969 YPEL5P62699 121 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 NCAPHQ15003 741 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 LVRNQ6Q4G3 990 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 RD3Q7Z3Z2 195 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 RYBPQ8N488 228 aaPredicted RBP13.89□□□□□ -0.19
LINC00116-203ENST00000611969 GPR156Q8NFN8 814 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 NEK11Q8NG66 645 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 CPA5Q8WXQ8 436 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 NKD1Q969G9 470 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 RAB7BQ96AH8 199 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 PCMTD1Q96MG8 357 aaPredicted RBP13.89□□□□□ -0.19
LINC00116-203ENST00000611969 CMKLR1Q99788 373 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 WRAP53Q9BUR4 548 aaKnown RBP13.89□□□□□ -0.19
LINC00116-203ENST00000611969 ATP13A1Q9HD20 1204 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 FAM207AQ9NSI2 230 aaPredicted RBP13.89□□□□□ -0.19
LINC00116-203ENST00000611969 TUBD1Q9UJT1 453 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 ANAPC2Q9UJX6 822 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 TMEM59LQ9UK28 342 aa13.89□□□□□ -0.19
LINC00116-203ENST00000611969 GFPT2O94808 682 aa13.88□□□□□ -0.19
LINC00116-203ENST00000611969 UGT2B4P06133 528 aa13.88□□□□□ -0.19
LINC00116-203ENST00000611969 CCDC172P0C7W6 258 aa13.88□□□□□ -0.19
LINC00116-203ENST00000611969 CTSEP14091 401 aa13.88□□□□□ -0.19
LINC00116-203ENST00000611969 MMP8P22894 467 aa13.88□□□□□ -0.19
LINC00116-203ENST00000611969 CD82P27701 267 aa13.88□□□□□ -0.19
LINC00116-203ENST00000611969 OR1E1P30953 314 aa13.88□□□□□ -0.19
LINC00116-203ENST00000611969 JAM2P57087 298 aa13.88□□□□□ -0.19
LINC00116-203ENST00000611969 NOMO3P69849 1222 aa13.88□□□□□ -0.19
LINC00116-203ENST00000611969 SLC20A2Q08357 652 aa13.88□□□□□ -0.19
LINC00116-203ENST00000611969 ZNF805Q5CZA5 627 aa13.88□□□□□ -0.19
LINC00116-203ENST00000611969 CERCAMQ5T4B2 595 aa13.88□□□□□ -0.19
LINC00116-203ENST00000611969 CCDC183Q5T5S1 534 aa13.88□□□□□ -0.19
LINC00116-203ENST00000611969 RETSATQ6NUM9 610 aa13.88□□□□□ -0.19
LINC00116-203ENST00000611969 ZNF783Q6ZMS7 281 aa13.88□□□□□ -0.19
LINC00116-203ENST00000611969 SCG3Q8WXD2 468 aaKnown RBP13.88□□□□□ -0.19
LINC00116-203ENST00000611969 TMEM159Q96B96 161 aa13.88□□□□□ -0.19
LINC00116-203ENST00000611969 PDXPQ96GD0 296 aa13.88□□□□□ -0.19
LINC00116-203ENST00000611969 TBCBQ99426 244 aa13.88□□□□□ -0.19
LINC00116-203ENST00000611969 RDH14Q9HBH5 336 aa13.88□□□□□ -0.19
LINC00116-203ENST00000611969 LRRC4CQ9HCJ2 640 aa13.88□□□□□ -0.19
LINC00116-203ENST00000611969 NOCTQ9UK39 431 aaKnown RBP13.88□□□□□ -0.19
LINC00116-203ENST00000611969 APPL1Q9UKG1 709 aa13.88□□□□□ -0.19
LINC00116-203ENST00000611969 SIK3Q9Y2K2 1263 aa13.88□□□□□ -0.19
LINC00116-203ENST00000611969 ZNF106Q9H2Y7 1883 aaKnown RBP13.88□□□□□ -0.19
LINC00116-203ENST00000611969 IGLV3-10A0A075B6K4 115 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 LGALS16A8MUM7 142 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 GOLGA8SH3BPF8 625 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 STMND1H3BQB6 276 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 KRIT1O00522 736 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 TM7SF2O76062 418 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 RASGRP1O95267 797 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 CCR10P46092 362 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 UBXN1Q04323 297 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 SYCP1Q15431 976 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 KLHL40Q2TBA0 621 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 MAP9Q49MG5 647 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 EFHC2Q5JST6 749 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 NAA35Q5VZE5 725 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 BNIPLQ7Z465 357 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 GKN2Q86XP6 184 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 RCBTB1Q8NDN9 531 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 C9orf43Q8TAL5 461 aaPredicted RBP13.87□□□□□ -0.19
LINC00116-203ENST00000611969 MIB2Q96AX9 1013 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 KLHL32Q96NJ5 620 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 ERGIC2Q96RQ1 377 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 NLRC4Q9NPP4 1024 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 COQ6Q9Y2Z9 468 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 OR1A2Q9Y585 309 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 CREBBPQ92793 2442 aa13.87□□□□□ -0.19
LINC00116-203ENST00000611969 ANKRD17O75179 2603 aaKnown RBP13.86□□□□□ -0.19
LINC00116-203ENST00000611969 CXorf51AA0A1B0GTR3 108 aa13.86□□□□□ -0.19
LINC00116-203ENST00000611969 ILVBLA1L0T0 632 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms