RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 ANKRD66B4E2M5 251 aa16.08■□□□□ 0.16
CLTCL1-207ENST00000611723 USP12O75317 370 aa16.08■□□□□ 0.16
CLTCL1-207ENST00000611723 PDGFBP01127 241 aaPredicted RBP16.08■□□□□ 0.16
CLTCL1-207ENST00000611723 UGT2B4P06133 528 aa16.08■□□□□ 0.16
CLTCL1-207ENST00000611723 TNNT3P45378 269 aaPredicted RBP16.08■□□□□ 0.16
CLTCL1-207ENST00000611723 SIGLEC14Q08ET2 396 aa16.08■□□□□ 0.16
CLTCL1-207ENST00000611723 STARD3Q14849 445 aa16.08■□□□□ 0.16
CLTCL1-207ENST00000611723 UBXN2BQ14CS0 331 aa16.08■□□□□ 0.16
CLTCL1-207ENST00000611723 BRD3Q15059 726 aa16.08■□□□□ 0.16
CLTCL1-207ENST00000611723 HIF1AQ16665 826 aa16.08■□□□□ 0.16
CLTCL1-207ENST00000611723 QPCTQ16769 361 aa16.08■□□□□ 0.16
CLTCL1-207ENST00000611723 DNAJC21Q5F1R6 531 aaKnown RBP16.08■□□□□ 0.16
CLTCL1-207ENST00000611723 SIRPB2Q5JXA9 342 aa16.08■□□□□ 0.16
CLTCL1-207ENST00000611723 FAM46CQ5VWP2 391 aa16.08■□□□□ 0.16
CLTCL1-207ENST00000611723 BRAT1Q6PJG6 821 aa16.08■□□□□ 0.16
CLTCL1-207ENST00000611723 LRRC39Q96DD0 335 aa16.08■□□□□ 0.16
CLTCL1-207ENST00000611723 SIGLEC10Q96LC7 697 aa16.08■□□□□ 0.16
CLTCL1-207ENST00000611723 KLHL32Q96NJ5 620 aa16.08■□□□□ 0.16
CLTCL1-207ENST00000611723 APOL2Q9BQE5 337 aa16.08■□□□□ 0.16
CLTCL1-207ENST00000611723 PCDHB9Q9Y5E1 797 aa16.08■□□□□ 0.16
CLTCL1-207ENST00000611723 PTPRZ1P23471 2315 aaPredicted RBP16.07■□□□□ 0.16
CLTCL1-207ENST00000611723 SDR42E2A6NKP2 422 aa16.07■□□□□ 0.16
CLTCL1-207ENST00000611723 RNASEH1O60930 286 aaKnown RBP16.07■□□□□ 0.16
CLTCL1-207ENST00000611723 ATG13O75143 517 aa16.07■□□□□ 0.16
CLTCL1-207ENST00000611723 HOXB2P14652 356 aa16.07■□□□□ 0.16
CLTCL1-207ENST00000611723 CHRNA4P43681 627 aa16.07■□□□□ 0.16
CLTCL1-207ENST00000611723 GRIA4P48058 902 aa16.07■□□□□ 0.16
CLTCL1-207ENST00000611723 POLR2LP62875 67 aaKnown RBP16.07■□□□□ 0.16
CLTCL1-207ENST00000611723 MSS51Q4VC12 460 aa16.07■□□□□ 0.16
CLTCL1-207ENST00000611723 KIAA1211LQ6NV74 962 aa16.07■□□□□ 0.16
CLTCL1-207ENST00000611723 CENPUQ71F23 418 aa16.07■□□□□ 0.16
CLTCL1-207ENST00000611723 KDELC2Q7Z4H8 507 aa16.07■□□□□ 0.16
CLTCL1-207ENST00000611723 SLC25A41Q8N5S1 370 aa16.07■□□□□ 0.16
CLTCL1-207ENST00000611723 DNAAF3Q8N9W5 541 aa16.07■□□□□ 0.16
CLTCL1-207ENST00000611723 PIP4K2CQ8TBX8 421 aa16.07■□□□□ 0.16
CLTCL1-207ENST00000611723 GRIN3AQ8TCU5 1115 aa16.07■□□□□ 0.16
CLTCL1-207ENST00000611723 AENQ8WTP8 325 aaKnown RBP16.07■□□□□ 0.16
CLTCL1-207ENST00000611723 PWWP2AQ96N64 755 aa16.07■□□□□ 0.16
CLTCL1-207ENST00000611723 SRPK1Q96SB4 655 aaKnown RBP16.07■□□□□ 0.16
CLTCL1-207ENST00000611723 FOXQ1Q9C009 403 aa16.07■□□□□ 0.16
CLTCL1-207ENST00000611723 BFARQ9NZS9 450 aa16.07■□□□□ 0.16
CLTCL1-207ENST00000611723 SARDHQ9UL12 918 aa16.07■□□□□ 0.16
CLTCL1-207ENST00000611723 MAGEB16A2A368 324 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 CCDC151A5D8V7 595 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 C1QTNF3-AMACRE9PGA6 284 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 H0Y858 1186 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 AVILO75366 819 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 FAM153BP0C7A2 387 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 TIMP2P16035 220 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 ITGB7P26010 798 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 AVPR2P30518 371 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 RPS9P46781 194 aaKnown RBP16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 SUOXP51687 545 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 COPAP53621 1224 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 SATB1Q01826 763 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 DHX9Q08211 1270 aaKnown RBP16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 SLMAPQ14BN4 828 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 CRY1Q16526 586 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 FAM153CQ494X1 144 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 PKN3Q6P5Z2 889 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 EMBQ6PCB8 327 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 SYT13Q7L8C5 426 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 ZSWIM9Q86XI8 627 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 NDUFAF2Q8N183 169 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 AGGF1Q8N302 714 aaeCLIP16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 LPCAT1Q8NF37 534 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 PJA1Q8NG27 643 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 PDCD6IPQ8WUM4 868 aaKnown RBP16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 ATOH1Q92858 354 aaPredicted RBP16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 RANBP9Q96S59 729 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 LYSMD1Q96S90 227 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 HDAC8Q9BY41 377 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 TXLNGYQ9BZA5 131 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 IL22Q9GZX6 179 aa16.06■□□□□ 0.16
CLTCL1-207ENST00000611723 UQCRHLA0A096LP55 91 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 A0A0J9YYE9 177 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 C16orf96A6NNT2 1141 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 ADH1BP00325 375 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 CPP00450 1065 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 IL1BP01584 269 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 TRBC1P01850 177 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 UQCRHP07919 91 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 TPH1P17752 444 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 C5AR1P21730 350 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 MGAT1P26572 445 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 SLC8A1P32418 973 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 EPHB1P54762 984 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 SESN2P58004 480 aaPredicted RBP16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 RPS14P62263 151 aaKnown RBP16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 ZBTB16Q05516 673 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 PDIA2Q13087 525 aaKnown RBP16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 GAS6Q14393 721 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 GALNT3Q14435 633 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 UGP2Q16851 508 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 CERCAMQ5T4B2 595 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 ZNF776Q68DI1 518 aaPredicted RBP16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 TMEM92Q6UXU6 159 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 Q6ZS52 159 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 CCNJLQ8IV13 435 aa16.05■□□□□ 0.16
CLTCL1-207ENST00000611723 MMAAQ8IVH4 418 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms