RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 MRPL57Q9BQC6 102 aaKnown RBP13.7□□□□□ -0.22
NEK3-205ENST00000610828 CINPQ9BW66 212 aaPredicted RBP13.7□□□□□ -0.22
NEK3-205ENST00000610828 RNF38Q9H0F5 515 aa13.7□□□□□ -0.22
NEK3-205ENST00000610828 MARCH4Q9P2E8 410 aaPredicted RBP13.7□□□□□ -0.22
NEK3-205ENST00000610828 C2orf78A6NCI8 922 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 H3BNC9 293 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 DCXO43602 365 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 TSPAN3O60637 253 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 CLDN11O75508 207 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 OXCT1P55809 520 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 DNAL1Q4LDG9 190 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 HECTD2Q5U5R9 776 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 WDR60Q8WVS4 1066 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 DNAJC1Q96KC8 554 aaKnown RBP13.69□□□□□ -0.22
NEK3-205ENST00000610828 IGSF5Q9NSI5 407 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 UBA2Q9UBT2 640 aaPredicted RBP13.69□□□□□ -0.22
NEK3-205ENST00000610828 SEPT3Q9UH03 358 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 ZDHHC2Q9UIJ5 367 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 CRYL1Q9Y2S2 319 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.69□□□□□ -0.22
NEK3-205ENST00000610828 GOLGA8QA0A0J9YX86 632 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 GOLGA8OA6NCC3 632 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 GOLGA8NF8WBI6 632 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 MATN2O00339 956 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 NEMP1O14524 444 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 ABLIM3O94929 683 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 SOD2P04179 222 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 RHOCP08134 193 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 CCDC166P0CW27 439 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 TPBGLP0DKB5 382 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 CCL5P13501 91 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 SCNN1BP51168 640 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 PRKAA1Q13131 559 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 ZNF177Q13360 481 aaPredicted RBP13.69□□□□□ -0.22
NEK3-205ENST00000610828 SEL1L3Q68CR1 1132 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 C16orf59Q7L2K0 433 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 TXNDC5Q8NBS9 432 aaKnown RBP13.69□□□□□ -0.22
NEK3-205ENST00000610828 OR13C4Q8NGS5 318 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 CHD5Q8TDI0 1954 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 KCNV2Q8TDN2 545 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 TSPAN17Q96FV3 270 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 TMEM169Q96HH4 297 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 OR52B2Q96RD2 323 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 MGME1Q9BQP7 344 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 THTPAQ9BU02 230 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 POMKQ9H5K3 350 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 TCF7L2Q9NQB0 619 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.69□□□□□ -0.22
NEK3-205ENST00000610828 C15orf41Q9Y2V0 281 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 VWA7Q9Y334 891 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 YIPF1Q9Y548 306 aa13.69□□□□□ -0.22
NEK3-205ENST00000610828 NEMP2A6NFY4 417 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 CBX4O00257 560 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 HDAC3O15379 428 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 MAGEC1O60732 1142 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 GLP2RO95838 553 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 S1PR4O95977 384 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 EPOP01588 193 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 TFEBP19484 476 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 RGRP47804 291 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 COPAP53621 1224 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 ASPHQ12797 758 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 ACSBG2Q5FVE4 666 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 AGAP9Q5VTM2 703 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 ALG1LQ6GMV1 187 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 KLC3Q6P597 504 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 GALNT7Q86SF2 657 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 PHTF2Q8N3S3 785 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 BRSK1Q8TDC3 778 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 CLPTM1LQ96KA5 538 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 PSKH2Q96QS6 385 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 NUF2Q9BZD4 464 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 C1orf21Q9H246 121 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 WDR55Q9H6Y2 383 aaPredicted RBP13.68□□□□□ -0.22
NEK3-205ENST00000610828 DCLRE1BQ9H816 532 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 SMPD4Q9NXE4 827 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 AGO1Q9UL18 857 aaKnown RBP13.68□□□□□ -0.22
NEK3-205ENST00000610828 PLA2G4CQ9UP65 541 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 PRRG1O14668 218 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 KDELR3O43731 214 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 GOT2P00505 430 aaKnown RBP13.68□□□□□ -0.22
NEK3-205ENST00000610828 LMNAP02545 664 aaKnown RBP13.68□□□□□ -0.22
NEK3-205ENST00000610828 LTA4HP09960 611 aaKnown RBP13.68□□□□□ -0.22
NEK3-205ENST00000610828 FSCBQ5H9T9 825 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 ADGRF1Q5T601 910 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 TPGS2Q68CL5 300 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 CNKSR3Q6P9H4 555 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 SCUBE1Q8IWY4 988 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 LMNTD2Q8IXW0 634 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 LSMEM2Q8N112 164 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 ENDOVQ8N8Q3 282 aaKnown RBP13.68□□□□□ -0.22
NEK3-205ENST00000610828 SCG3Q8WXD2 468 aaKnown RBP13.68□□□□□ -0.22
NEK3-205ENST00000610828 WBP2Q969T9 261 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 RMDN1Q96DB5 314 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 MYRFLQ96LU7 910 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 LBHD1Q9BQE6 289 aaPredicted RBP13.68□□□□□ -0.22
NEK3-205ENST00000610828 MUC3BQ9H195 1237 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 RETREG1Q9H6L5 497 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 NCKIPSDQ9NZQ3 722 aa13.68□□□□□ -0.22
NEK3-205ENST00000610828 LOC100653049A0A140TA62 436 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms