RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 SNX11Q9Y5W9 270 aa14.39□□□□□ -0.11
HDDC2-209ENST00000609477 IGLON5A6NGN9 336 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 HACD1B0YJ81 288 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 APOC4-APOC2K7ER74 178 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 FPGTO14772 594 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 SPINT1O43278 529 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 PCDHGA12O60330 932 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 MAP3K6O95382 1288 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 PAK4O96013 591 aaPredicted RBP14.38□□□□□ -0.11
HDDC2-209ENST00000609477 APOC2P02655 101 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 WNT1P04628 370 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 CEACAM1P13688 526 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 MMP12P39900 470 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 ARRB1P49407 418 aaPredicted RBP14.38□□□□□ -0.11
HDDC2-209ENST00000609477 NXPH1P58417 271 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 RPL26P61254 145 aaKnown RBP14.38□□□□□ -0.11
HDDC2-209ENST00000609477 FOXK2Q01167 660 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 ITKQ08881 620 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 AP1B1Q10567 949 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 XRCC4Q13426 336 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 SLC14A2Q15849 920 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 UAP1L1Q3KQV9 507 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 ARMC12Q5T9G4 340 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 ABI3BPQ7Z7G0 1075 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 PAF1Q8N7H5 531 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 TFB1MQ8WVM0 346 aaKnown RBP14.38□□□□□ -0.11
HDDC2-209ENST00000609477 IFT43Q96FT9 208 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 VAT1Q99536 393 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 ELF4Q99607 663 aaPredicted RBP14.38□□□□□ -0.11
HDDC2-209ENST00000609477 SEMA3CQ99985 751 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 FERMT1Q9BQL6 677 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 PCDH12Q9NPG4 1184 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 FSCN3Q9NQT6 498 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 RPL26L1Q9UNX3 145 aaKnown RBP14.38□□□□□ -0.11
HDDC2-209ENST00000609477 PCDHGC4Q9Y5F7 938 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 DCHS1Q96JQ0 3298 aa14.38□□□□□ -0.11
HDDC2-209ENST00000609477 A6NNZ2 444 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 WNT9AO14904 365 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 TJP3O95049 919 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 PGLSO95336 258 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 JCHAINP01591 159 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 PRLRP16471 622 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 RABIFP47224 123 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 RXRGP48443 463 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 MARCKSL1P49006 195 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 CCT8P50990 548 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 MAXP61244 160 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 DYNLT1P63172 113 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 PRKD1Q15139 912 aaPredicted RBP14.37□□□□□ -0.11
HDDC2-209ENST00000609477 KAZNQ674X7 775 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 KYAT3Q6YP21 454 aaKnown RBP14.37□□□□□ -0.11
HDDC2-209ENST00000609477 DPPA4Q7L190 304 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 PIP4P1Q86T03 277 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 ZSWIM9Q86XI8 627 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 RAVER1Q8IY67 606 aaKnown RBP14.37□□□□□ -0.11
HDDC2-209ENST00000609477 CENPTQ96BT3 561 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 SCRN2Q96FV2 425 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 HES6Q96HZ4 224 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 KLF6Q99612 283 aaPredicted RBP14.37□□□□□ -0.11
HDDC2-209ENST00000609477 OSBPL8Q9BZF1 889 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 TM7SF3Q9NS93 570 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 DNPEPQ9ULA0 475 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 PCDHB9Q9Y5E1 797 aa14.37□□□□□ -0.11
HDDC2-209ENST00000609477 A0A1B0GTQ1 180 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 KCNK1O00180 336 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 PSMD11O00231 422 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 FLRT2O43155 660 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 FZD6O60353 706 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 MMP20O60882 483 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 CPP00450 1065 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 HLA-DQB2P05538 268 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 THEGLP0DJG4 465 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 CYP2A6P11509 494 aaPredicted RBP14.36□□□□□ -0.11
HDDC2-209ENST00000609477 CD59P13987 128 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 LIG3P49916 1009 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 YPEL5P62699 121 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 FAM193AP78312 1265 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 CCZ1BP86790 482 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 CCZ1P86791 482 aaPredicted RBP14.36□□□□□ -0.11
HDDC2-209ENST00000609477 FGL2Q14314 439 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 INAVAQ3KP66 663 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 TEX44Q53QW1 395 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 NPNTQ6UXI9 565 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 ARRDC2Q8TBH0 407 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 KLK6Q92876 244 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 NSMCE3Q96MG7 304 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 GPR27Q9NS67 375 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 GGT7Q9UJ14 662 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 GUCA1BQ9UMX6 200 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 ITM2BQ9Y287 266 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 RAI2Q9Y5P3 530 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 DOCK9Q9BZ29 2069 aa14.36□□□□□ -0.11
HDDC2-209ENST00000609477 DCDC2BA2VCK2 349 aa14.35□□□□□ -0.11
HDDC2-209ENST00000609477 GOLGA6L9A6NEM1 432 aa14.35□□□□□ -0.11
HDDC2-209ENST00000609477 ELFN1P0C7U0 828 aa14.35□□□□□ -0.11
HDDC2-209ENST00000609477 C6P13671 934 aa14.35□□□□□ -0.11
HDDC2-209ENST00000609477 ADCY2Q08462 1091 aa14.35□□□□□ -0.11
HDDC2-209ENST00000609477 TRAF2Q12933 501 aa14.35□□□□□ -0.11
HDDC2-209ENST00000609477 PTK2BQ14289 1009 aa14.35□□□□□ -0.11
HDDC2-209ENST00000609477 LRRC14Q15048 493 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms