RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 DUOXA1Q1HG43 343 aa14.35□□□□□ -0.11
CTSA-219ENST00000607841 TMEM52BQ4KMG9 183 aa14.35□□□□□ -0.11
CTSA-219ENST00000607841 PLA2G2CQ5R387 149 aa14.35□□□□□ -0.11
CTSA-219ENST00000607841 ANKRD20A2Q5SQ80 823 aa14.35□□□□□ -0.11
CTSA-219ENST00000607841 ANKRD20A1Q5TYW2 823 aa14.35□□□□□ -0.11
CTSA-219ENST00000607841 ANKRD20A3Q5VUR7 823 aa14.35□□□□□ -0.11
CTSA-219ENST00000607841 CCDC70Q6NSX1 233 aa14.35□□□□□ -0.11
CTSA-219ENST00000607841 USP45Q70EL2 814 aa14.35□□□□□ -0.11
CTSA-219ENST00000607841 ZSWIM9Q86XI8 627 aa14.35□□□□□ -0.11
CTSA-219ENST00000607841 RASGEF1CQ8N431 466 aa14.35□□□□□ -0.11
CTSA-219ENST00000607841 SKA1Q96BD8 255 aa14.35□□□□□ -0.11
CTSA-219ENST00000607841 IFT43Q96FT9 208 aa14.35□□□□□ -0.11
CTSA-219ENST00000607841 SPATA13Q96N96 652 aa14.35□□□□□ -0.11
CTSA-219ENST00000607841 RBM15Q96T37 977 aaKnown RBP eCLIP14.35□□□□□ -0.11
CTSA-219ENST00000607841 NAPGQ99747 312 aaPredicted RBP14.35□□□□□ -0.11
CTSA-219ENST00000607841 C1QTNF7Q9BXJ2 289 aa14.35□□□□□ -0.11
CTSA-219ENST00000607841 USP29Q9HBJ7 922 aa14.35□□□□□ -0.11
CTSA-219ENST00000607841 PCDH9Q9HC56 1237 aa14.35□□□□□ -0.11
CTSA-219ENST00000607841 TMEM74BQ9NUR3 256 aa14.35□□□□□ -0.11
CTSA-219ENST00000607841 FAM153AQ9UHL3 310 aa14.35□□□□□ -0.11
CTSA-219ENST00000607841 ZNF148Q9UQR1 794 aa14.35□□□□□ -0.11
CTSA-219ENST00000607841 FANCMQ8IYD8 2048 aa14.35□□□□□ -0.11
CTSA-219ENST00000607841 PIEZO1Q92508 2521 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 PRAMEF26H0Y7S4 382 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 ANXA9O76027 345 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 TM7SF2O76062 418 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 ZNF806P0C7X5 589 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 NFKB1P19838 968 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 CD68P34810 354 aaPredicted RBP14.34□□□□□ -0.11
CTSA-219ENST00000607841 ACTN2P35609 894 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 AFF3P51826 1226 aaKnown RBP14.34□□□□□ -0.11
CTSA-219ENST00000607841 RACK1P63244 317 aaKnown RBP14.34□□□□□ -0.11
CTSA-219ENST00000607841 SPEM2Q0P670 501 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 TEAD4Q15561 434 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 CSRP2Q16527 193 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 ZNF284Q2VY69 593 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 TMEM259Q4ZIN3 620 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 LRRC73Q5JTD7 316 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 DRICH1Q6PGQ1 229 aaPredicted RBP14.34□□□□□ -0.11
CTSA-219ENST00000607841 FAM71DQ8N9W8 422 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 ACTRT1Q8TDG2 376 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 PIH1D2Q8WWB5 315 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 C1orf54Q8WWF1 131 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 ASB12Q8WXK4 309 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 ATG4AQ8WYN0 398 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 TADA1Q96BN2 335 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 LRRC45Q96CN5 670 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 SCRN2Q96FV2 425 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 SERAC1Q96JX3 654 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 TMEM121Q9BTD3 319 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 SLC17A9Q9BYT1 436 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 GBA3Q9H227 469 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 SEMA4GQ9NTN9 838 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 ZFR2Q9UPR6 939 aaKnown RBP14.34□□□□□ -0.11
CTSA-219ENST00000607841 CHKBQ9Y259 395 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 ITM2BQ9Y287 266 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 AAR2Q9Y312 384 aaKnown RBP14.34□□□□□ -0.11
CTSA-219ENST00000607841 PPIL1Q9Y3C6 166 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 MYO15AQ9UKN7 3530 aa14.34□□□□□ -0.11
CTSA-219ENST00000607841 ATXN2Q99700 1313 aaKnown RBP14.34□□□□□ -0.11
CTSA-219ENST00000607841 PLXND1Q9Y4D7 1925 aa14.33□□□□□ -0.11
CTSA-219ENST00000607841 GOLGA6CA6NDK9 693 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 GOLGA6BA6NDN3 693 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 IGLON5A6NGN9 336 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 PGRMC1O00264 195 aaKnown RBP14.33□□□□□ -0.12
CTSA-219ENST00000607841 SLC31A1O15431 190 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 SPINT1O43278 529 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 MMP20O60882 483 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 GCATO75600 419 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 PAK4O96013 591 aaPredicted RBP14.33□□□□□ -0.12
CTSA-219ENST00000607841 MT-CYBP00156 380 aaPredicted RBP14.33□□□□□ -0.12
CTSA-219ENST00000607841 PRKCGP05129 697 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 ITGAVP06756 1048 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 PDHA1P08559 390 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 GOLGA6DP0CG33 693 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 ITIH2P19823 946 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 HNRNPA2B1P22626 353 aaKnown RBP14.33□□□□□ -0.12
CTSA-219ENST00000607841 AKT2P31751 481 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 MMP12P39900 470 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 GRIA4P48058 902 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 LIG3P49916 1009 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 GEMP55040 296 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 CDK18Q07002 472 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 MPP3Q13368 585 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 SNX1Q13596 522 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 STAT4Q14765 748 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 SIX1Q15475 284 aaPredicted RBP14.33□□□□□ -0.12
CTSA-219ENST00000607841 OASLQ15646 514 aaKnown RBP14.33□□□□□ -0.12
CTSA-219ENST00000607841 PCSK7Q16549 785 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 P3H1Q32P28 736 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 TRIM61Q5EBN2 209 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 PAPD7Q5XG87 772 aaKnown RBP14.33□□□□□ -0.12
CTSA-219ENST00000607841 SEL1L3Q68CR1 1132 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 NAPEPLDQ6IQ20 393 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 SLC23A3Q6PIS1 610 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 ARHGEF18Q6ZSZ5 1173 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 DPPA4Q7L190 304 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 ZCCHC9Q8N567 271 aaKnown RBP14.33□□□□□ -0.12
CTSA-219ENST00000607841 DCLK2Q8N568 766 aa14.33□□□□□ -0.12
CTSA-219ENST00000607841 C12orf50Q8NA57 414 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms