RNA–Protein interactions for RNA: ENST00000606426.1

CUX2P1-201, Transcript of cut like homeobox 2 pseudogene 1, humanhuman

BASIC

Gene CUX2P1, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2P1-201ENST00000606426 ARHGEF7Q14155 803 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 POM121L1PQ3SYA9 428 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 TMEM52BQ4KMG9 183 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 SETMARQ53H47 684 aaPredicted RBP7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 LYSMD4Q5XG99 296 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 LAIR1Q6GTX8 287 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 NAPEPLDQ6IQ20 393 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 CCDC137Q6PK04 289 aaKnown RBP7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 SYDE1Q6ZW31 735 aaPredicted RBP7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 B4GALNT4Q76KP1 1039 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 HORMAD1Q86X24 394 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 CREG2Q8IUH2 290 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 PRELID2Q8N945 189 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 KIF18AQ8NI77 898 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 CEP76Q8TAP6 659 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 FAM174AQ8TBP5 190 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 CCDC110Q8TBZ0 833 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 PIH1D2Q8WWB5 315 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 ASB12Q8WXK4 309 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 SKA1Q96BD8 255 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 RMDN1Q96DB5 314 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 SCRN2Q96FV2 425 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 MS4A14Q96JA4 679 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 RBM15Q96T37 977 aaKnown RBP eCLIP7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 AP1M1Q9BXS5 423 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 CEP41Q9BYV8 373 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 PCDH12Q9NPG4 1184 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 SERGEFQ9UGK8 458 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 MBD1Q9UIS9 605 aaPredicted RBP7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 GMEB2Q9UKD1 530 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 SMG5Q9UPR3 1016 aaKnown RBP7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 R4GN57 208 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 ATG2BQ96BY7 2078 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 NYNRINQ9P2P1 1898 aaKnown RBP7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 A0A0J9YYE9 177 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 LOC285095A0A1B0GVY8 99 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 A0A1W2PPC4 97 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 TTC24A2A3L6 582 aaPredicted RBP7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 CAPN8A6NHC0 703 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 ANKRD66B4E2M5 251 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 E7EVH7 732 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 TOR1BO14657 336 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 NDC80O14777 642 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 ZNF185O15231 689 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 LATO43561 262 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 MAGEC1O60732 1142 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 LRP3O75074 770 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 PMPCBO75439 489 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 TM7SF2O76062 418 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 FSBPO95073 299 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 EPN2O95208 641 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 ECEL1O95672 775 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 NDST3O95803 873 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 MT-CYBP00156 380 aaPredicted RBP7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 TRBC1P01850 177 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 FGF1P05230 155 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 RETP07949 1114 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 ELFN1P0C7U0 828 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 ZNF30P17039 623 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 BCKDHBP21953 392 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 CD27P26842 260 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 PSMB4P28070 264 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 VIPR1P32241 457 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 COILP38432 576 aaPredicted RBP7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 MMP12P39900 470 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 ABL2P42684 1182 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 LMAN1P49257 510 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 DHPSP49366 369 aaPredicted RBP7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 METAP1P53582 386 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 GDF10P55107 478 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 WNT3AP56704 352 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 TAS2R38P59533 333 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 FAM193AP78312 1265 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 SARNPP82979 210 aaKnown RBP7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 SRSF5Q13243 272 aaKnown RBP7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 PCSK7Q16549 785 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 WHAMMP3Q1A5X7 153 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 DPPA4Q7L190 304 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 CYP2U1Q7Z449 544 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 LINC00523Q86TU6 105 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 KLHDC8BQ8IXV7 354 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 TMEFF1Q8IYR6 380 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 RGL4Q8IZJ4 473 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 FAM160A2Q8N612 972 aaPredicted RBP7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 DENND6BQ8NEG7 585 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 LPCAT1Q8NF37 534 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 DNASE2BQ8WZ79 361 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 SLCO2A1Q92959 643 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 VOPP1Q96AW1 172 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 CAPZA3Q96KX2 299 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 HSPA12BQ96MM6 686 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 MCCC1Q96RQ3 725 aaPredicted RBP7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 LYSMD1Q96S90 227 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 MLPHQ9BV36 600 aaPredicted RBP7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 TRABDQ9H4I3 376 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 C6orf106Q9H6K1 298 aaPredicted RBP7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 C10orf88Q9H8K7 445 aa7.53□□□□□ -1.2
CUX2P1-201ENST00000606426 LRRC40Q9H9A6 602 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms