RNA–Protein interactions for RNA: ENST00000604754.1

ZSWIM8-222, Transcript of zinc finger SWIM-type containing 8, human

TSL 1 (best)

Gene ZSWIM8, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZSWIM8-222	ENST00000604754	SMAD6	O43541	496 aa	Known RBP	11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	RHOBTB1	O94844	696 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	TMCC1	O94876	653 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	GFAP	P14136	432 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	ZNF135	P52742	658 aa	Predicted RBP	11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	ARHGAP8	P85298	464 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	SLC12A1	Q13621	1099 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	PCLAF	Q15004	111 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	POTEH	Q6S545	545 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	RNF148	Q8N7C7	305 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	GBP7	Q8N8V2	638 aa	Predicted RBP	11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	HEXDC	Q8WVB3	486 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	SORCS1	Q8WY21	1168 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	IMP4	Q96G21	291 aa	Known RBP	11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	THTPA	Q9BU02	230 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	RHOJ	Q9H4E5	214 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	RAD54B	Q9Y620	910 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754		E5RI56	91 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	LAG3	P18627	525 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	CNTF	P26441	200 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	MSX2	P35548	267 aa	Predicted RBP	11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	RAB10	P61026	200 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	ZXDB	P98169	803 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	UGP2	Q16851	508 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	PARP15	Q460N3	678 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	TSTD2	Q5T7W7	516 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	MSANTD2	Q6P1R3	559 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	ANKRD33	Q7Z3H0	272 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	DPF3	Q92784	378 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	FAM161B	Q96MY7	647 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	PHACTR1	Q9C0D0	580 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	THAP1	Q9NVV9	213 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	FETUB	Q9UGM5	382 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	CHD9	Q3L8U1	2897 aa		11.42	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	SRP72	O76094	671 aa	Known RBP	11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	ALDH1A2	O94788	518 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	PAX3	P23760	479 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	KPNA1	P52294	538 aa	Predicted RBP	11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	IL10RB	Q08334	325 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	ASPH	Q12797	758 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	PPM1L	Q5SGD2	360 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	FAM151B	Q6UXP7	276 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	TMC5	Q6UXY8	1006 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	KYAT3	Q6YP21	454 aa	Known RBP	11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	PIWIL2	Q8TC59	973 aa	Known RBP	11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	ASIC4	Q96FT7	647 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	C17orf80	Q9BSJ5	609 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	GATA5	Q9BWX5	397 aa	Predicted RBP	11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	MTG2	Q9H4K7	406 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	CDH22	Q9UJ99	828 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	SPO11	Q9Y5K1	396 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	VCAN	P13611	3396 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754		A0A1B0GVM2	712 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	TCAF2	A6NFQ2	919 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	SRRM3	A6NNA2	597 aa	Predicted RBP	11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	TRIM13	O60858	407 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	ENTPD5	O75356	428 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	CLDN11	O75508	207 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	CRCP	O75575	148 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	FSBP	O95073	299 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	UNC5C	O95185	931 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	EZR	P15311	586 aa	Known RBP	11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	ELF3	P78545	371 aa	Predicted RBP	11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	BNIP1	Q12981	228 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	TMEM198	Q66K66	360 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	STEAP4	Q687X5	459 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	SCIMP	Q6UWF3	145 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	SH2D5	Q6ZV89	423 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	GAREM2	Q75VX8	874 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	CFAP61	Q8NHU2	1237 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	OLFM1	Q99784	485 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	KIFC1	Q9BW19	673 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	TBC1D10A	Q9BXI6	508 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	WWP1	Q9H0M0	922 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	POMK	Q9H5K3	350 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	ASAH2	Q9NR71	780 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	ABCB8	Q9NUT2	735 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	FKBPL	Q9UIM3	349 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	HBS1L	Q9Y450	684 aa	Known RBP	11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	ABHD14A-ACY1	A0A1B0GW23	586 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	CD3EAP	O15446	510 aa	Known RBP	11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	OR1I1	O60431	355 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	PRAMEF11	O60813	436 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	BAG2	O95816	211 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	TIMP1	P01033	207 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	PROC	P04070	461 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	SERPINE1	P05121	402 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	DLD	P09622	509 aa	Known RBP	11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	TFEB	P19484	476 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	ARNT	P27540	789 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	ABCE1	P61221	599 aa	Known RBP	11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	ARL13A	Q5H913	290 aa	Predicted RBP	11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	RNF43	Q68DV7	783 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	YTHDF3	Q7Z739	585 aa	Known RBP	11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	MFSD6L	Q8IWD5	586 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	ANKLE1	Q8NAG6	615 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	PDZD8	Q8NEN9	1154 aa		11.41	□□□□□ -0.58
ZSWIM8-222	ENST00000604754	POF1B	Q8WVV4	589 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms