RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 PARGQ86W56 976 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 TP53INP2Q8IXH6 220 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 CCNYQ8ND76 341 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 BTN2A2Q8WVV5 523 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 RAPGEF5Q92565 580 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 MAML1Q92585 1016 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 CENPTQ96BT3 561 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 BMFQ96LC9 184 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 KLF6Q99612 283 aaPredicted RBP11.63□□□□□ -0.55
CCDC12-209ENST00000604164 GGT7Q9UJ14 662 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 DNPEPQ9ULA0 475 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 PHTF1Q9UMS5 762 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 CA5BQ9Y2D0 317 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 TRPM6Q9BX84 2022 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 CNOT1A5YKK6 2376 aaKnown RBP11.62□□□□□ -0.55
CCDC12-209ENST00000604164 POM121BA6NF01 834 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 MUSKO15146 869 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 RAD51BO15315 384 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 CPP00450 1065 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 C1SP09871 688 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 C6P13671 934 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 HTR1BP28222 390 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 NR2C2P49116 596 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 LIG3P49916 1009 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 NAP1L1P55209 391 aaKnown RBP11.62□□□□□ -0.55
CCDC12-209ENST00000604164 PFN3P60673 137 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 PDE1CQ14123 709 aaPredicted RBP11.62□□□□□ -0.55
CCDC12-209ENST00000604164 SHBQ15464 509 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 LRRC73Q5JTD7 316 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 PRAMEF14Q5SWL7 426 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 ARMC12Q5T9G4 340 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 SLC9A4Q6AI14 798 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 USP45Q70EL2 814 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 DPPA4Q7L190 304 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 DAAM2Q86T65 1068 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 GAS2L3Q86XJ1 694 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 GATAD2AQ86YP4 633 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 RFX6Q8HWS3 928 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 CCDC13Q8IYE1 715 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 RCOR2Q8IZ40 523 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 GALNT15Q8N3T1 639 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 PQLC3Q8N755 202 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 PDCD6IPQ8WUM4 868 aaKnown RBP11.62□□□□□ -0.55
CCDC12-209ENST00000604164 ADAMTS14Q8WXS8 1223 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 CNDP2Q96KP4 475 aaKnown RBP11.62□□□□□ -0.55
CCDC12-209ENST00000604164 BAG1Q99933 345 aaPredicted RBP11.62□□□□□ -0.55
CCDC12-209ENST00000604164 DUSP23Q9BVJ7 150 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 NOD2Q9HC29 1040 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 NT5MQ9NPB1 228 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 GPR27Q9NS67 375 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 RBM22Q9NW64 420 aaKnown RBP eCLIP11.62□□□□□ -0.55
CCDC12-209ENST00000604164 DNAJC28Q9NX36 388 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 DTLQ9NZJ0 730 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 NCKIPSDQ9NZQ3 722 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 BTBD3Q9Y2F9 522 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 NEUROG3Q9Y4Z2 214 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 PCDHGA1Q9Y5H4 931 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 ALG6Q9Y672 507 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 PCNX2A6NKB5 2137 aa11.62□□□□□ -0.55
CCDC12-209ENST00000604164 SOWAHDA6NJG2 315 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 C3orf70A6NLC5 250 aaPredicted RBP11.61□□□□□ -0.55
CCDC12-209ENST00000604164 BTNL10A8MVZ5 291 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 ENC1O14682 589 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 ZRANB2O95218 330 aaKnown RBP eCLIP11.61□□□□□ -0.555e-8■■■■□ 20.2
CCDC12-209ENST00000604164 PGLSO95336 258 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 CSF2P04141 144 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 TNNT1P13805 278 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 NME1P15531 152 aaKnown RBP11.61□□□□□ -0.55
CCDC12-209ENST00000604164 DGKAP23743 735 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 CETN2P41208 172 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 BLKP51451 505 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 EPHB1P54762 984 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 RPL26P61254 145 aaKnown RBP11.61□□□□□ -0.55
CCDC12-209ENST00000604164 GBE1Q04446 702 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 PPIDQ08752 370 aaKnown RBP11.61□□□□□ -0.55
CCDC12-209ENST00000604164 ZNF211Q13398 564 aaPredicted RBP11.61□□□□□ -0.55
CCDC12-209ENST00000604164 ILKQ13418 452 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 MTM1Q13496 603 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 FZD2Q14332 565 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 ALG1LQ6GMV1 187 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 MACC1Q6ZN28 852 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 RAB44Q7Z6P3 723 aaPredicted RBP11.61□□□□□ -0.55
CCDC12-209ENST00000604164 CPNE8Q86YQ8 564 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 PGBD5Q8N414 524 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 EID2Q8N6I1 236 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 TP53I13Q8NBR0 393 aaPredicted RBP11.61□□□□□ -0.55
CCDC12-209ENST00000604164 TPCN2Q8NHX9 752 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 RBM41Q96IZ5 413 aaKnown RBP11.61□□□□□ -0.55
CCDC12-209ENST00000604164 TBATAQ96M53 351 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 SEMA3CQ99985 751 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 USP29Q9HBJ7 922 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 NLGN3Q9NZ94 848 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 RPL26L1Q9UNX3 145 aaKnown RBP11.61□□□□□ -0.55
CCDC12-209ENST00000604164 TTLL3Q9Y4R7 772 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 PCDHGC4Q9Y5F7 938 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 HEY1Q9Y5J3 304 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 CSNK1G3Q9Y6M4 447 aa11.61□□□□□ -0.55
CCDC12-209ENST00000604164 PSMD11O00231 422 aa11.6□□□□□ -0.55
CCDC12-209ENST00000604164 PDE2AO00408 941 aaPredicted RBP11.6□□□□□ -0.55
CCDC12-209ENST00000604164 MTSS1O43312 755 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms