RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 SLC17A7Q9P2U7 560 aa8.75□□□□□ -1.01
CSMD1-216ENST00000602557 RCCD1A6NED2 376 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 CLDN25C9JDP6 229 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 STYK1Q6J9G0 422 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 RAMP2O60895 175 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 VPS4BO75351 444 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 MYL4P12829 197 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 MAGEA12P43365 314 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 NDST1P52848 882 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 HUNKP57058 714 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 MED22Q15528 200 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 MARC1Q5VT66 337 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 SV2AQ7L0J3 742 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 TXNRD3Q86VQ6 643 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 MEIOBQ8N635 442 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 FITM2Q8N6M3 262 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 PIGKQ92643 395 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 GLT1D1Q96MS3 346 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 OSBPL7Q9BZF2 842 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 NMUR2Q9GZQ4 415 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 CYP3A43Q9HB55 503 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 TLR8Q9NR97 1041 aaKnown RBP8.74□□□□□ -1.01
CSMD1-216ENST00000602557 CDH22Q9UJ99 828 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 N6AMT1Q9Y5N5 214 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 PTPRMP28827 1452 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 TYMPP19971 482 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 BNIP3Q12983 259 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 OVOS1Q6IE37 1185 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 SPAG16Q8N0X2 631 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 SMARCD1Q96GM5 515 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 MSANTD3Q96H12 275 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 GAKO14976 1311 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 OR14I1A6ND48 311 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 CDC42P60953 191 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 SPANXN3Q5MJ09 141 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 TTC23Q5W5X9 447 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 RBM15BQ8NDT2 890 aaKnown RBP8.74□□□□□ -1.01
CSMD1-216ENST00000602557 TMC2Q8TDI7 906 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 EEF1AKMT1Q8WVE0 214 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 ENOPH1Q9UHY7 261 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 SERPINA6P08185 405 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 PRKACBP22694 351 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 AP2S1P53680 142 aaPredicted RBP8.74□□□□□ -1.01
CSMD1-216ENST00000602557 SWI5Q1ZZU3 235 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 FIGNQ5HY92 759 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 MOXD1Q6UVY6 613 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 TRMT11Q7Z4G4 463 aaKnown RBP8.74□□□□□ -1.01
CSMD1-216ENST00000602557 GPSM1Q86YR5 675 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 IFNLR1Q8IU57 520 aaPredicted RBP8.74□□□□□ -1.01
CSMD1-216ENST00000602557 PJA1Q8NG27 643 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 VPS35Q96QK1 796 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 CHCHD6Q9BRQ6 235 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 PNPLA8Q9NP80 782 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 SMPD4Q9NXE4 827 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 URODP06132 367 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 CDH15P55291 814 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 TNK2Q07912 1038 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 SMCO1Q147U7 214 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 ZNF280DQ6N043 979 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 ELMOD2Q8IZ81 293 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 SLC2A14Q8TDB8 520 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 TMEM159Q96B96 161 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 BBS4Q96RK4 519 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 LIN28AQ9H9Z2 209 aaKnown RBP8.74□□□□□ -1.01
CSMD1-216ENST00000602557 ACSS2Q9NR19 701 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 KLHL28Q9NXS3 571 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 GSTK1Q9Y2Q3 226 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 SLIT1O75093 1534 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 FAM86B1E9PN63 330 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 GPR15P49685 360 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 GMFBP60983 142 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 CRADDP78560 199 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 TCEA2Q15560 299 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 RD3Q7Z3Z2 195 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 CLNKQ7Z7G1 428 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 OR56A4Q8NGH8 313 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 TRPM5Q9NZQ8 1165 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 ERGIC3Q9Y282 383 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 TIMM13Q9Y5L4 95 aaPredicted RBP8.74□□□□□ -1.01
CSMD1-216ENST00000602557 CD3EAPO15446 510 aaKnown RBP8.74□□□□□ -1.01
CSMD1-216ENST00000602557 OR7A10O76100 309 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 NUDT14O95848 222 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 PSKH1P11801 424 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 AMPD2Q01433 879 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 BICRALQ6AI39 1079 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 GCNT7Q6ZNI0 430 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 GALNT12Q8IXK2 581 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 C18orf25Q96B23 403 aaPredicted RBP8.74□□□□□ -1.01
CSMD1-216ENST00000602557 MRPL9Q9BYD2 267 aaKnown RBP8.74□□□□□ -1.01
CSMD1-216ENST00000602557 MAGEE1Q9HCI5 957 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 USP20Q9Y2K6 914 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 ARID1AO14497 2285 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 FAM149AA5PLN7 773 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 POMCP01189 267 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 CCNB1P14635 433 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 MYBPC1Q00872 1141 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 GARNL3Q5VVW2 1013 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 FKBP14Q9NWM8 211 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 AHSPQ9NZD4 102 aa8.74□□□□□ -1.01
CSMD1-216ENST00000602557 GNPTGQ9UJJ9 305 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms