RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 PARD6AQ9NPB6 346 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 EIF2B4Q9UI10 523 aaKnown RBP13.84□□□□□ -0.19
VRK3-219ENST00000600137 TRHDEQ9UKU6 1024 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 CHKBQ9Y259 395 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 DRG1Q9Y295 367 aaKnown RBP13.84□□□□□ -0.19
VRK3-219ENST00000600137 PCDHB9Q9Y5E1 797 aa13.84□□□□□ -0.19
VRK3-219ENST00000600137 PTPRZ1P23471 2315 aaPredicted RBP13.84□□□□□ -0.19
VRK3-219ENST00000600137 A0A1W2PPC4 97 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 A0A1W2PQU0 124 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 TSPAN6O43657 245 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 GCATO75600 419 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 FSBPO95073 299 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 SERPINF2P08697 491 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 GM2AP17900 193 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 MMP12P39900 470 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 ETF1P62495 437 aaKnown RBP13.83□□□□□ -0.2
VRK3-219ENST00000600137 CCDC15Q0P6D6 951 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 CDKN3Q16667 212 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 LONRF2Q1L5Z9 754 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 LYSMD4Q5XG99 296 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 HORMAD1Q86X24 394 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 CREG2Q8IUH2 290 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 SYT12Q8IV01 421 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 FAM71DQ8N9W8 422 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 GLIS1Q8NBF1 620 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 CCDC110Q8TBZ0 833 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 ACTRT1Q8TDG2 376 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 SCRN2Q96FV2 425 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 SPATA13Q96N96 652 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 MLPHQ9BV36 600 aaPredicted RBP13.83□□□□□ -0.2
VRK3-219ENST00000600137 PHTF1Q9UMS5 762 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 ZKSCAN5Q9Y2L8 839 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 TTLL3Q9Y4R7 772 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 PCDHGA5Q9Y5G8 931 aa13.83□□□□□ -0.2
VRK3-219ENST00000600137 A0A0U1RQS6 177 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 LOC285095A0A1B0GVY8 99 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 A0A1W2PQ67 120 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 IGLON5A6NGN9 336 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 PATE3B3GLJ2 98 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 MMP20O60882 483 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 METTL18O95568 372 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 ITGAVP06756 1048 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 MSNP26038 577 aaKnown RBP13.82□□□□□ -0.2
VRK3-219ENST00000600137 CD27P26842 260 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 STIP1P31948 543 aaKnown RBP13.82□□□□□ -0.2
VRK3-219ENST00000600137 KCNJ1P48048 391 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 POLR2LP62875 67 aaKnown RBP13.82□□□□□ -0.2
VRK3-219ENST00000600137 CREB5Q02930 508 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 SNX1Q13596 522 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 CCDC6Q16204 474 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 CYP1B1Q16678 543 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 ARMC12Q5T9G4 340 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 LIPIQ6XZB0 460 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 DPPA4Q7L190 304 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 PRUNE1Q86TP1 453 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 PIGKQ92643 395 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 KLK6Q92876 244 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 FEM1CQ96JP0 617 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 MRGPRX2Q96LB1 330 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 KLF6Q99612 283 aaPredicted RBP13.82□□□□□ -0.2
VRK3-219ENST00000600137 NAPGQ99747 312 aaPredicted RBP13.82□□□□□ -0.2
VRK3-219ENST00000600137 GBA3Q9H227 469 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 SMOC1Q9H4F8 434 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 PCDH9Q9HC56 1237 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 UBP1Q9NZI7 540 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 KLHL8Q9P2G9 620 aaPredicted RBP13.82□□□□□ -0.2
VRK3-219ENST00000600137 B4GALT6Q9UBX8 382 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 RAB23Q9ULC3 237 aa13.82□□□□□ -0.2
VRK3-219ENST00000600137 ATXN2Q99700 1313 aaKnown RBP13.82□□□□□ -0.2
VRK3-219ENST00000600137 A0A0J9YYE9 177 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 A0A1W2PR77 199 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 CFAP69A5D8W1 941 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 PDE2AO00408 941 aaPredicted RBP13.81□□□□□ -0.2
VRK3-219ENST00000600137 RAD51BO15315 384 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 NEBLO76041 1014 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 PCDH8O95206 1070 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 PAK4O96013 591 aaPredicted RBP13.81□□□□□ -0.2
VRK3-219ENST00000600137 CPP00450 1065 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 TRBC1P01850 177 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 WNT1P04628 370 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 ETS1P14921 441 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 TCP1P17987 556 aaKnown RBP13.81□□□□□ -0.2
VRK3-219ENST00000600137 LHCGRP22888 699 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 MAT2AP31153 395 aaKnown RBP13.81□□□□□ -0.2
VRK3-219ENST00000600137 ADRA1AP35348 466 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 HNF1BP35680 557 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 PLA2G5P39877 138 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 MPLP40238 635 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 BNC1Q01954 994 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 QPCTQ16769 361 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 KCTD19Q17RG1 926 aaPredicted RBP13.81□□□□□ -0.2
VRK3-219ENST00000600137 WDR45BQ5MNZ6 344 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 KCTD11Q693B1 232 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 KIAA1161Q6NSJ0 714 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 TTC27Q6P3X3 843 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 CYP2U1Q7Z449 544 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 PDCD6IPQ8WUM4 868 aaKnown RBP13.81□□□□□ -0.2
VRK3-219ENST00000600137 MAIP1Q8WWC4 291 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 ASB12Q8WXK4 309 aa13.81□□□□□ -0.2
VRK3-219ENST00000600137 RUBCNQ92622 972 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms