RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 ITM2CQ9NQX7 267 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 SERGEFQ9UGK8 458 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 SCML1Q9UN30 329 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 CACNA1EQ15878 2313 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 TSPAN11A1L157 253 aa19.01■□□□□ 0.63
CCDC9-205ENST00000600117 PLK4O00444 970 aa19.01■□□□□ 0.63
CCDC9-205ENST00000600117 KPNA3O00505 521 aaPredicted RBP19.01■□□□□ 0.63
CCDC9-205ENST00000600117 HTRA2O43464 458 aaPredicted RBP19.01■□□□□ 0.63
CCDC9-205ENST00000600117 OPHN1O60890 802 aa19.01■□□□□ 0.63
CCDC9-205ENST00000600117 SOCS5O75159 536 aa19.01■□□□□ 0.63
CCDC9-205ENST00000600117 RHOBTB1O94844 696 aa19.01■□□□□ 0.63
CCDC9-205ENST00000600117 IGLV3-19P01714 112 aa19.01■□□□□ 0.63
CCDC9-205ENST00000600117 SPINK2P20155 84 aa19.01■□□□□ 0.63
CCDC9-205ENST00000600117 ITGB7P26010 798 aa19.01■□□□□ 0.63
CCDC9-205ENST00000600117 CD86P42081 329 aa19.01■□□□□ 0.63
CCDC9-205ENST00000600117 BCL2L1Q07817 233 aa19.01■□□□□ 0.63
CCDC9-205ENST00000600117 SLC14A2Q15849 920 aa19.01■□□□□ 0.63
CCDC9-205ENST00000600117 P3H1Q32P28 736 aa19.01■□□□□ 0.63
CCDC9-205ENST00000600117 ZNF805Q5CZA5 627 aa19.01■□□□□ 0.63
CCDC9-205ENST00000600117 ZNF572Q7Z3I7 529 aaPredicted RBP19.01■□□□□ 0.63
CCDC9-205ENST00000600117 PRUNE1Q86TP1 453 aa19.01■□□□□ 0.63
CCDC9-205ENST00000600117 ZSWIM9Q86XI8 627 aa19.01■□□□□ 0.63
CCDC9-205ENST00000600117 ECHDC3Q96DC8 303 aa19.01■□□□□ 0.63
CCDC9-205ENST00000600117 ZNF641Q96N77 438 aaPredicted RBP19.01■□□□□ 0.63
CCDC9-205ENST00000600117 KLHL32Q96NJ5 620 aa19.01■□□□□ 0.63
CCDC9-205ENST00000600117 SUV39H2Q9H5I1 410 aa19.01■□□□□ 0.63
CCDC9-205ENST00000600117 DKK3Q9UBP4 350 aa19.01■□□□□ 0.63
CCDC9-205ENST00000600117 PCDHGC4Q9Y5F7 938 aa19.01■□□□□ 0.63
CCDC9-205ENST00000600117 PLXND1Q9Y4D7 1925 aa19.01■□□□□ 0.63
CCDC9-205ENST00000600117 A0A1W2PP55 124 aa19■□□□□ 0.63
CCDC9-205ENST00000600117 SERPINF2P08697 491 aa19■□□□□ 0.63
CCDC9-205ENST00000600117 CEACAM1P13688 526 aa19■□□□□ 0.63
CCDC9-205ENST00000600117 ETS1P14921 441 aa19■□□□□ 0.63
CCDC9-205ENST00000600117 CSRP1P21291 193 aaKnown RBP19■□□□□ 0.63
CCDC9-205ENST00000600117 SERPINA4P29622 427 aa19■□□□□ 0.63
CCDC9-205ENST00000600117 FNTAP49354 379 aa19■□□□□ 0.63
CCDC9-205ENST00000600117 TPMTP51580 245 aa19■□□□□ 0.63
CCDC9-205ENST00000600117 CNTN1Q12860 1018 aa19■□□□□ 0.63
CCDC9-205ENST00000600117 MAP7D1Q3KQU3 841 aa19■□□□□ 0.63
CCDC9-205ENST00000600117 TTC31Q49AM3 519 aaPredicted RBP19■□□□□ 0.63
CCDC9-205ENST00000600117 ITPRIPL1Q6GPH6 555 aa19■□□□□ 0.63
CCDC9-205ENST00000600117 CCDC137Q6PK04 289 aaKnown RBP19■□□□□ 0.63
CCDC9-205ENST00000600117 USP30Q70CQ3 517 aa19■□□□□ 0.63
CCDC9-205ENST00000600117 PARS2Q7L3T8 475 aaKnown RBP19■□□□□ 0.63
CCDC9-205ENST00000600117 KLHDC8BQ8IXV7 354 aa19■□□□□ 0.63
CCDC9-205ENST00000600117 HDDC3Q8N4P3 179 aa19■□□□□ 0.63
CCDC9-205ENST00000600117 ATL2Q8NHH9 583 aa19■□□□□ 0.63
CCDC9-205ENST00000600117 SPATA22Q8NHS9 363 aa19■□□□□ 0.63
CCDC9-205ENST00000600117 SPOCK2Q92563 424 aa19■□□□□ 0.63
CCDC9-205ENST00000600117 OXNAD1Q96HP4 312 aaPredicted RBP19■□□□□ 0.63
CCDC9-205ENST00000600117 RBM15Q96T37 977 aaKnown RBP eCLIP19■□□□□ 0.63
CCDC9-205ENST00000600117 DDX47Q9H0S4 455 aaKnown RBP19■□□□□ 0.63
CCDC9-205ENST00000600117 FBXL12Q9NXK8 326 aa19■□□□□ 0.63
CCDC9-205ENST00000600117 RSPH14Q9UHP6 348 aa19■□□□□ 0.63
CCDC9-205ENST00000600117 LNP1A1A4G5 178 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 C16orf96A6NNT2 1141 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 F5H423 210 aaPredicted RBP18.99■□□□□ 0.63
CCDC9-205ENST00000600117 CCDC188H7C350 402 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 FZD6O60353 706 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 METTL18O95568 372 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 TOP3BO95985 862 aaKnown RBP18.99■□□□□ 0.63
CCDC9-205ENST00000600117 MT-CYBP00156 380 aaPredicted RBP18.99■□□□□ 0.63
CCDC9-205ENST00000600117 IFNB1P01574 187 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 ACADMP11310 421 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 PSMB4P28070 264 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 P2RY2P41231 377 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 CREB5Q02930 508 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 PIP5KL1Q5T9C9 394 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 KDELC1Q6UW63 502 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 HCAR2Q8TDS4 363 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 RLN3Q8WXF3 142 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 ZCCHC14Q8WYQ9 949 aaKnown RBP18.99■□□□□ 0.63
CCDC9-205ENST00000600117 PPP1R16AQ96I34 528 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 SCNM1Q9BWG6 230 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 TDRD1Q9BXT4 1180 aaKnown RBP18.99■□□□□ 0.63
CCDC9-205ENST00000600117 HDAC8Q9BY41 377 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 NEUROG2Q9H2A3 272 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 CYP8B1Q9UNU6 501 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 LHX6Q9UPM6 363 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 NEU2Q9Y3R4 380 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 RAI2Q9Y5P3 530 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 MRFAP1Q9Y605 127 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 HELZ2Q9BYK8 2649 aaKnown RBP18.99■□□□□ 0.63
CCDC9-205ENST00000600117 THADAQ6YHU6 1953 aa18.99■□□□□ 0.63
CCDC9-205ENST00000600117 IGHV1OR15-9A0A0B4J2B8 117 aa18.98■□□□□ 0.63
CCDC9-205ENST00000600117 ZNF217O75362 1048 aa18.98■□□□□ 0.63
CCDC9-205ENST00000600117 RNASEH2AO75792 299 aaKnown RBP18.98■□□□□ 0.63
CCDC9-205ENST00000600117 PGLSO95336 258 aa18.98■□□□□ 0.63
CCDC9-205ENST00000600117 PRLP01236 227 aa18.98■□□□□ 0.63
CCDC9-205ENST00000600117 ZSCAN5DPP0CG00 497 aa18.98■□□□□ 0.63
CCDC9-205ENST00000600117 TIMP2P16035 220 aa18.98■□□□□ 0.63
CCDC9-205ENST00000600117 RPL22P35268 128 aaKnown RBP18.98■□□□□ 0.63
CCDC9-205ENST00000600117 KCTD19Q17RG1 926 aaPredicted RBP18.98■□□□□ 0.63
CCDC9-205ENST00000600117 WHAMMP3Q1A5X7 153 aa18.98■□□□□ 0.63
CCDC9-205ENST00000600117 AGBL4Q5VU57 503 aa18.98■□□□□ 0.63
CCDC9-205ENST00000600117 ARHGEF18Q6ZSZ5 1173 aa18.98■□□□□ 0.63
CCDC9-205ENST00000600117 ERN2Q76MJ5 926 aaKnown RBP18.98■□□□□ 0.63
CCDC9-205ENST00000600117 FRMD1Q8N878 549 aa18.98■□□□□ 0.63
CCDC9-205ENST00000600117 SPATA4Q8NEY3 305 aa18.98■□□□□ 0.63
CCDC9-205ENST00000600117 OMDQ99983 421 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms