RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 ATP8A1Q9Y2Q0 1164 aa15.33■□□□□ 0.04
LIG1-219ENST00000600055 COQ6Q9Y2Z9 468 aa15.33■□□□□ 0.04
LIG1-219ENST00000600055 ADAMTS9Q9P2N4 1935 aa15.33■□□□□ 0.04
LIG1-219ENST00000600055 A8MX80 341 aa15.32■□□□□ 0.04
LIG1-219ENST00000600055 H0Y8X5 98 aa15.32■□□□□ 0.04
LIG1-219ENST00000600055 TM4SF5O14894 197 aa15.32■□□□□ 0.04
LIG1-219ENST00000600055 HNRNPA2B1P22626 353 aaKnown RBP15.32■□□□□ 0.04
LIG1-219ENST00000600055 AKT2P31751 481 aa15.32■□□□□ 0.04
LIG1-219ENST00000600055 CTSKP43235 329 aa15.32■□□□□ 0.04
LIG1-219ENST00000600055 FAM193AP78312 1265 aa15.32■□□□□ 0.04
LIG1-219ENST00000600055 IFI35P80217 286 aaPredicted RBP15.32■□□□□ 0.04
LIG1-219ENST00000600055 SGCGQ13326 291 aa15.32■□□□□ 0.04
LIG1-219ENST00000600055 PUM1Q14671 1186 aaKnown RBP eCLIP15.32■□□□□ 0.047e-11■□□□□ 8.5
LIG1-219ENST00000600055 STAT4Q14765 748 aa15.32■□□□□ 0.04
LIG1-219ENST00000600055 PRKD1Q15139 912 aaPredicted RBP15.32■□□□□ 0.04
LIG1-219ENST00000600055 PTPRRQ15256 657 aa15.32■□□□□ 0.04
LIG1-219ENST00000600055 RALGPS1Q5JS13 557 aa15.32■□□□□ 0.04
LIG1-219ENST00000600055 ALG1LQ6GMV1 187 aa15.32■□□□□ 0.04
LIG1-219ENST00000600055 KDM7AQ6ZMT4 941 aa15.32■□□□□ 0.04
LIG1-219ENST00000600055 GCNT7Q6ZNI0 430 aa15.32■□□□□ 0.04
LIG1-219ENST00000600055 UBL4BQ8N7F7 174 aa15.32■□□□□ 0.04
LIG1-219ENST00000600055 RTKNQ9BST9 563 aa15.32■□□□□ 0.04
LIG1-219ENST00000600055 OSBPL8Q9BZF1 889 aa15.32■□□□□ 0.04
LIG1-219ENST00000600055 FNDC3AQ9Y2H6 1198 aaKnown RBP15.32■□□□□ 0.04
LIG1-219ENST00000600055 PCDHB9Q9Y5E1 797 aa15.32■□□□□ 0.04
LIG1-219ENST00000600055 RAI2Q9Y5P3 530 aa15.32■□□□□ 0.04
LIG1-219ENST00000600055 SHROOM3Q8TF72 1996 aa15.32■□□□□ 0.04
LIG1-219ENST00000600055 MIF4GDA9UHW6 222 aaKnown RBP15.31■□□□□ 0.04
LIG1-219ENST00000600055 TLR4O00206 839 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 NRDCO43847 1150 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 OPHN1O60890 802 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 SOCS5O75159 536 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 PGLSO95336 258 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 CPP00450 1065 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 PDHA1P08559 390 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 SDHBP21912 280 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 PTPN7P35236 360 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 MMP12P39900 470 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 SUOXP51687 545 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 ELP6Q0PNE2 266 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 RALGDSQ12967 914 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 SLC45A4Q5BKX6 768 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 CCDC181Q5TID7 509 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 ERAP2Q6P179 960 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 ZNF662Q6ZS27 426 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 BZW1Q7L1Q6 419 aaKnown RBP15.31■□□□□ 0.04
LIG1-219ENST00000600055 SPATS2Q86XZ4 545 aaKnown RBP15.31■□□□□ 0.04
LIG1-219ENST00000600055 MFSD2AQ8NA29 543 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 TFB1MQ8WVM0 346 aaKnown RBP15.31■□□□□ 0.04
LIG1-219ENST00000600055 HES6Q96HZ4 224 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 AGAP3Q96P47 875 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 SMIM14Q96QK8 99 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 KLF6Q99612 283 aaPredicted RBP15.31■□□□□ 0.04
LIG1-219ENST00000600055 FAM118BQ9BPY3 351 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 BRD8Q9H0E9 1235 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 C10orf88Q9H8K7 445 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 DNAAF2Q9NVR5 837 aaKnown RBP15.31■□□□□ 0.04
LIG1-219ENST00000600055 AMACRQ9UHK6 382 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 PPP2R2CQ9Y2T4 447 aa15.31■□□□□ 0.04
LIG1-219ENST00000600055 POM121BA6NF01 834 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 APOC4-APOC2K7ER74 178 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 TM7SF2O76062 418 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 CER1O95813 267 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 APOC2P02655 101 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 MMP2P08253 660 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 C6P13671 934 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 CTPS1P17812 591 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 PTPN3P26045 913 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 CD86P42081 329 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 PI4KAP42356 2102 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 LIG3P49916 1009 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 NXPH1P58417 271 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 POLR2LP62875 67 aaKnown RBP15.3■□□□□ 0.04
LIG1-219ENST00000600055 OTUD4Q01804 1114 aaKnown RBP15.3■□□□□ 0.04
LIG1-219ENST00000600055 ARMC12Q5T9G4 340 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 IL27RAQ6UWB1 636 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 DPPA4Q7L190 304 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 OR13H1Q8NG92 308 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 ACTL9Q8TC94 416 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 PIH1D2Q8WWB5 315 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 SKA1Q96BD8 255 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 KLHDC7BQ96G42 594 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 BMFQ96LC9 184 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 KCNF1Q9H3M0 494 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 CAAP1Q9H8G2 361 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 B4GALT6Q9UBX8 382 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 CHKBQ9Y259 395 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 EFR3BQ9Y2G0 817 aa15.3■□□□□ 0.04
LIG1-219ENST00000600055 DOCK9Q9BZ29 2069 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 A0A0U1RQS6 177 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 GOLGA8CPA6NN73 597 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 H7C0C1 242 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 FZD6O60353 706 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 THEGLP0DJG4 465 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 CD59P13987 128 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 CES1P23141 567 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 CETN2P41208 172 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 ATP5OP48047 213 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 SKOR1P84550 965 aa15.29■□□□□ 0.04
LIG1-219ENST00000600055 IL9RQ01113 521 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms