RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 ZBED5Q49AG3 693 aa13.33□□□□□ -0.28
VRK3-209ENST00000594948 BTBD8Q5XKL5 378 aa13.33□□□□□ -0.28
VRK3-209ENST00000594948 ISLR2Q6UXK2 745 aa13.33□□□□□ -0.28
VRK3-209ENST00000594948 FASTKD5Q7L8L6 764 aaKnown RBP13.33□□□□□ -0.28
VRK3-209ENST00000594948 FAM35AQ86V20 835 aa13.33□□□□□ -0.28
VRK3-209ENST00000594948 TMEM86AQ8N2M4 240 aa13.33□□□□□ -0.28
VRK3-209ENST00000594948 LZTR1Q8N653 840 aa13.33□□□□□ -0.28
VRK3-209ENST00000594948 GTF3C2Q8WUA4 911 aaPredicted RBP13.33□□□□□ -0.28
VRK3-209ENST00000594948 L3HYPDHQ96EM0 354 aa13.33□□□□□ -0.28
VRK3-209ENST00000594948 CYP2S1Q96SQ9 504 aa13.33□□□□□ -0.28
VRK3-209ENST00000594948 GPATCH1Q9BRR8 931 aaKnown RBP13.33□□□□□ -0.28
VRK3-209ENST00000594948 FICDQ9BVA6 458 aa13.33□□□□□ -0.28
VRK3-209ENST00000594948 TKTL2Q9H0I9 626 aa13.33□□□□□ -0.28
VRK3-209ENST00000594948 ELP3Q9H9T3 547 aa13.33□□□□□ -0.28
VRK3-209ENST00000594948 CCM2LQ9NUG4 571 aaPredicted RBP13.33□□□□□ -0.28
VRK3-209ENST00000594948 ABCD2Q9UBJ2 740 aa13.33□□□□□ -0.28
VRK3-209ENST00000594948 CDH7Q9ULB5 785 aa13.33□□□□□ -0.28
VRK3-209ENST00000594948 HSD17B1P14061 328 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 HNRNPLP14866 589 aaKnown RBP eCLIP13.32□□□□□ -0.28
VRK3-209ENST00000594948 IMPDH1P20839 514 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 TTKP33981 857 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 C1QTNF8P60827 252 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 STX1BP61266 288 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 ATP6V0D1P61421 351 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 PRKCQQ04759 706 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 BNIP2Q12982 314 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 POU6F1Q14863 301 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 MAP7D1Q3KQU3 841 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 UBXN11Q5T124 520 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 LARP4Q71RC2 724 aaKnown RBP eCLIP13.32□□□□□ -0.28
VRK3-209ENST00000594948 BEND5Q7L4P6 421 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 BHLHA9Q7RTU4 235 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 CAMK1DQ8IU85 385 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 COLGALT2Q8IYK4 626 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 MYO1HQ8N1T3 1032 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 BBS5Q8N3I7 341 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 TERB1Q8NA31 727 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.32□□□□□ -0.28
VRK3-209ENST00000594948 SLC45A3Q96JT2 553 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 ASB2Q96Q27 587 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 SMOQ99835 787 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 TRIM62Q9BVG3 475 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 GSTO2Q9H4Y5 243 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 TBC1D13Q9NVG8 400 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 ARHGEF38Q9NXL2 777 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 CCDC167Q9P0B6 97 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 NDUFAF1Q9Y375 327 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 TRAF6Q9Y4K3 522 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 ANKRD36A6QL64 1941 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 A0A1B0GTW7 788 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 MATN3O15232 486 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 FGF10O15520 208 aaPredicted RBP13.32□□□□□ -0.28
VRK3-209ENST00000594948 CSPG5O95196 566 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 HOXC13P31276 330 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 LEPRP48357 1165 aaKnown RBP13.32□□□□□ -0.28
VRK3-209ENST00000594948 LHX1P48742 406 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 NDST2P52849 883 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 NFKB2Q00653 900 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 FOXM1Q08050 763 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 CSHL1Q14406 222 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 INPP5AQ14642 412 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 COQ5Q5HYK3 327 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 ZNF470Q6ECI4 717 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 TIGD7Q6NT04 549 aaPredicted RBP13.32□□□□□ -0.28
VRK3-209ENST00000594948 RWDD4Q6NW29 188 aaKnown RBP13.32□□□□□ -0.28
VRK3-209ENST00000594948 NEPROQ6NW34 567 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 GPR141Q7Z602 305 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 ARHGAP12Q8IWW6 846 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 ANKRD13AQ8IZ07 590 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 GPC2Q8N158 579 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 ATPAF2Q8N5M1 289 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 ZMIZ2Q8NF64 920 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 IPMKQ8NFU5 416 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 ZNF420Q8TAQ5 688 aaPredicted RBP13.32□□□□□ -0.28
VRK3-209ENST00000594948 FNDC8Q8TC99 324 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 TMIGD2Q96BF3 282 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 FEM1CQ96JP0 617 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 UBXN10Q96LJ8 280 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 OSMRQ99650 979 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 CIB1Q99828 191 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 OSBPL6Q9BZF3 934 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 MUC13Q9H3R2 512 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 NOL11Q9H8H0 719 aaKnown RBP13.32□□□□□ -0.28
VRK3-209ENST00000594948 ARNT2Q9HBZ2 717 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 CRTAC1Q9NQ79 661 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.32□□□□□ -0.28
VRK3-209ENST00000594948 KLK14Q9P0G3 267 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 NEU3Q9UQ49 428 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 CROCCQ5TZA2 2017 aa13.32□□□□□ -0.28
VRK3-209ENST00000594948 MBLAC1A4D2B0 266 aaPredicted RBP13.31□□□□□ -0.28
VRK3-209ENST00000594948 HHLA1C9JL84 531 aa13.31□□□□□ -0.28
VRK3-209ENST00000594948 AKAP10O43572 662 aa13.31□□□□□ -0.28
VRK3-209ENST00000594948 CLASP2O75122 1294 aaKnown RBP13.31□□□□□ -0.28
VRK3-209ENST00000594948 WISP3O95389 354 aaPredicted RBP13.31□□□□□ -0.28
VRK3-209ENST00000594948 GPX3P22352 226 aa13.31□□□□□ -0.28
VRK3-209ENST00000594948 ADCYAP1R1P41586 468 aa13.31□□□□□ -0.28
VRK3-209ENST00000594948 PGGT1BP53609 377 aa13.31□□□□□ -0.28
VRK3-209ENST00000594948 RALGDSQ12967 914 aa13.31□□□□□ -0.28
VRK3-209ENST00000594948 KIAA0319Q5VV43 1072 aa13.31□□□□□ -0.28
VRK3-209ENST00000594948 WSCD1Q658N2 575 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms