RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 OPRD1P41143 372 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 LAMB3Q13751 1172 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 CNGA3Q16281 694 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 MYLK3Q32MK0 819 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 CARD16Q5EG05 197 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 EMC10Q5UCC4 262 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 PDPK2PQ6A1A2 396 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 KIAA0930Q6ICG6 404 aaPredicted RBP20.92■□□□□ 0.94
PNKP-203ENST00000593946 Q6ZVU0 165 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 NLRP9Q7RTR0 991 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 TRABD2AQ86V40 505 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 BLOC1S5Q8TDH9 187 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 FRS2Q8WU20 508 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 MZB1Q8WU39 189 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 NXPE3Q969Y0 559 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 CHFRQ96EP1 664 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 TUBGCP5Q96RT8 1024 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 C20orf96Q9NUD7 363 aaPredicted RBP20.92■□□□□ 0.94
PNKP-203ENST00000593946 ELOVL2Q9NXB9 296 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.92■□□□□ 0.94
PNKP-203ENST00000593946 HECAQ9UBI9 543 aaPredicted RBP20.92■□□□□ 0.94
PNKP-203ENST00000593946 PCDHB9Q9Y5E1 797 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 GRXCR2A6NFK2 248 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 FOXO6A8MYZ6 492 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 FAM155BO75949 473 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 PIGNO95427 931 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 PIRTP0C851 137 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 GKP32189 559 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 HPDP32754 393 aaPredicted RBP20.92■□□□□ 0.94
PNKP-203ENST00000593946 NNMTP40261 264 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 EIF2DP41214 584 aaKnown RBP20.92■□□□□ 0.94
PNKP-203ENST00000593946 ARCN1P48444 511 aaKnown RBP20.92■□□□□ 0.94
PNKP-203ENST00000593946 CCNHP51946 323 aaPredicted RBP20.92■□□□□ 0.94
PNKP-203ENST00000593946 GYS2P54840 703 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 KDSRQ06136 332 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 EIF4HQ15056 248 aaKnown RBP20.92■□□□□ 0.94
PNKP-203ENST00000593946 QPCTQ16769 361 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 ARMC12Q5T9G4 340 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 DPY19L3Q6ZPD9 716 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 RYBPQ8N488 228 aaPredicted RBP20.92■□□□□ 0.94
PNKP-203ENST00000593946 TERB1Q8NA31 727 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 OR13J1Q8NGT2 312 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 PEX13Q92968 403 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 CPEB1Q9BZB8 566 aaKnown RBP20.92■□□□□ 0.94
PNKP-203ENST00000593946 SLC17A6Q9P2U8 582 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 SPO11Q9Y5K1 396 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 ACTL7BQ9Y614 415 aa20.92■□□□□ 0.94
PNKP-203ENST00000593946 POP4O95707 220 aaKnown RBP20.91■□□□□ 0.94
PNKP-203ENST00000593946 PAMP19021 973 aa20.91■□□□□ 0.94
PNKP-203ENST00000593946 SP100P23497 879 aaPredicted RBP20.91■□□□□ 0.94
PNKP-203ENST00000593946 SERPINA4P29622 427 aa20.91■□□□□ 0.94
PNKP-203ENST00000593946 GRIA4P48058 902 aa20.91■□□□□ 0.94
PNKP-203ENST00000593946 RPL26P61254 145 aaKnown RBP20.91■□□□□ 0.94
PNKP-203ENST00000593946 SMAD1Q15797 465 aaKnown RBP20.91■□□□□ 0.94
PNKP-203ENST00000593946 ITPRIPL2Q3MIP1 535 aa20.91■□□□□ 0.94
PNKP-203ENST00000593946 HSP90AA5PQ58FG0 334 aa20.91■□□□□ 0.94
PNKP-203ENST00000593946 TEDDM1Q5T9Z0 273 aa20.91■□□□□ 0.94
PNKP-203ENST00000593946 NAIF1Q69YI7 327 aaPredicted RBP20.91■□□□□ 0.94
PNKP-203ENST00000593946 TAOK1Q7L7X3 1001 aa20.91■□□□□ 0.94
PNKP-203ENST00000593946 OR2A12Q8NGT7 310 aa20.91■□□□□ 0.94
PNKP-203ENST00000593946 TTC8Q8TAM2 541 aa20.91■□□□□ 0.94
PNKP-203ENST00000593946 PIH1D2Q8WWB5 315 aa20.91■□□□□ 0.94
PNKP-203ENST00000593946 RIMKLBQ9ULI2 386 aa20.91■□□□□ 0.94
PNKP-203ENST00000593946 RPL26L1Q9UNX3 145 aaKnown RBP20.91■□□□□ 0.94
PNKP-203ENST00000593946 PSAT1Q9Y617 370 aa20.91■□□□□ 0.94
PNKP-203ENST00000593946 ARL5AQ9Y689 179 aa20.91■□□□□ 0.94
PNKP-203ENST00000593946 SCN8AQ9UQD0 1980 aa20.91■□□□□ 0.94
PNKP-203ENST00000593946 IQANK1A0A1B0GTG1 560 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 TTC34A8MYJ7 566 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 WASH3PC4AMC7 463 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 TIMM44O43615 452 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 VAPBO95292 243 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 KRT15P19012 456 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 CBX1P83916 185 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 ACVR1Q04771 509 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 KDM7AQ6ZMT4 941 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 SRRM1Q8IYB3 904 aaKnown RBP20.9■□□□□ 0.94
PNKP-203ENST00000593946 COL4A2P08572 1712 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 BNIP3LO60238 219 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 SLC8A1P32418 973 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 SERPINB9P50453 376 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 PPP2R2AP63151 447 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 GRM3Q14832 879 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 PACS1Q6VY07 963 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 CNTN4Q8IWV2 1026 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 MDGA1Q8NFP4 955 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 SMIM14Q96QK8 99 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 AGAP2Q99490 1192 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 CPNE1Q99829 537 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 UBE2ZQ9H832 354 aaPredicted RBP20.9■□□□□ 0.94
PNKP-203ENST00000593946 SENP1Q9P0U3 644 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 SLC8A2Q9UPR5 921 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 KCTD3Q9Y597 815 aa20.9■□□□□ 0.94
PNKP-203ENST00000593946 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.89■□□□□ 0.93
PNKP-203ENST00000593946 CRTAMO95727 393 aa20.89■□□□□ 0.93
PNKP-203ENST00000593946 KCNA5P22460 613 aa20.89■□□□□ 0.93
PNKP-203ENST00000593946 EPHB1P54762 984 aa20.89■□□□□ 0.93
PNKP-203ENST00000593946 RAD51Q06609 339 aa20.89■□□□□ 0.93
PNKP-203ENST00000593946 SMAD4Q13485 552 aaKnown RBP20.89■□□□□ 0.93
PNKP-203ENST00000593946 TAF1AQ15573 450 aaPredicted RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms