RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 ZSWIM9Q86XI8 627 aa15.38■□□□□ 0.05
TRIM28-203ENST00000593582 CPNE8Q86YQ8 564 aa15.38■□□□□ 0.05
TRIM28-203ENST00000593582 OR4C6Q8NH72 309 aa15.38■□□□□ 0.05
TRIM28-203ENST00000593582 SLC35G2Q8TBE7 412 aa15.38■□□□□ 0.05
TRIM28-203ENST00000593582 ZCCHC14Q8WYQ9 949 aaKnown RBP15.38■□□□□ 0.05
TRIM28-203ENST00000593582 SCUBE2Q9NQ36 999 aa15.38■□□□□ 0.05
TRIM28-203ENST00000593582 SPTLC3Q9NUV7 552 aa15.38■□□□□ 0.05
TRIM28-203ENST00000593582 COQ6Q9Y2Z9 468 aa15.38■□□□□ 0.05
TRIM28-203ENST00000593582 ZFHX4Q86UP3 3567 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 A0A1W2PQ67 120 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 CFAP69A5D8W1 941 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 TRAFD1O14545 582 aaPredicted RBP15.37■□□□□ 0.05
TRIM28-203ENST00000593582 SCAMP1O15126 338 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 SOCS5O75159 536 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 PRKCGP05129 697 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 JUNDP17535 347 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 ARHGAP25P42331 645 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 TAS2R40P59535 323 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 MESDQ14696 234 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 IRF4Q15306 451 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 PROX2Q3B8N5 592 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 RALGPS1Q5JS13 557 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 TMPRSS12Q86WS5 348 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 RHOT2Q8IXI1 618 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 TP53I13Q8NBR0 393 aaPredicted RBP15.37■□□□□ 0.05
TRIM28-203ENST00000593582 ZNF548Q8NEK5 533 aaPredicted RBP15.37■□□□□ 0.05
TRIM28-203ENST00000593582 PCDH19Q8TAB3 1148 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 BTN2A2Q8WVV5 523 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 NUDCD1Q96RS6 583 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 MGME1Q9BQP7 344 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 ANP32EQ9BTT0 268 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 DUSP23Q9BVJ7 150 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 MBNL1Q9NR56 388 aaKnown RBP15.37■□□□□ 0.05
TRIM28-203ENST00000593582 NLGN3Q9NZ94 848 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 ZMIZ1Q9ULJ6 1067 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 USP24Q9UPU5 2620 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 DMXL2Q8TDJ6 3036 aa15.37■□□□□ 0.05
TRIM28-203ENST00000593582 KMT2BQ9UMN6 2715 aaPredicted RBP15.37■□□□□ 0.05
TRIM28-203ENST00000593582 TTC24A2A3L6 582 aaPredicted RBP15.36■□□□□ 0.05
TRIM28-203ENST00000593582 ZZEF1O43149 2961 aa15.36■□□□□ 0.05
TRIM28-203ENST00000593582 MFSD11O43934 449 aa15.36■□□□□ 0.05
TRIM28-203ENST00000593582 ELFN1P0C7U0 828 aa15.36■□□□□ 0.05
TRIM28-203ENST00000593582 ACP1P24666 158 aa15.36■□□□□ 0.05
TRIM28-203ENST00000593582 NFKBIAP25963 317 aa15.36■□□□□ 0.05
TRIM28-203ENST00000593582 HNF1BP35680 557 aa15.36■□□□□ 0.05
TRIM28-203ENST00000593582 GARSP41250 739 aaKnown RBP15.36■□□□□ 0.05
TRIM28-203ENST00000593582 DAB2P98082 770 aa15.36■□□□□ 0.05
TRIM28-203ENST00000593582 SEMG2Q02383 582 aa15.36■□□□□ 0.05
TRIM28-203ENST00000593582 GALNT2Q10471 571 aa15.36■□□□□ 0.05
TRIM28-203ENST00000593582 EIF2B5Q13144 721 aaKnown RBP15.36■□□□□ 0.05
TRIM28-203ENST00000593582 TBX2Q13207 712 aaPredicted RBP15.36■□□□□ 0.05
TRIM28-203ENST00000593582 PAFAH1B3Q15102 231 aaKnown RBP15.36■□□□□ 0.05
TRIM28-203ENST00000593582 AGERQ15109 404 aa15.36■□□□□ 0.05
TRIM28-203ENST00000593582 WSCD2Q2TBF2 565 aa15.36■□□□□ 0.05
TRIM28-203ENST00000593582 TPRG1LQ5T0D9 272 aa15.36■□□□□ 0.05
TRIM28-203ENST00000593582 NCBP2-AS2Q69YL0 99 aa15.36■□□□□ 0.05
TRIM28-203ENST00000593582 KDM7AQ6ZMT4 941 aa15.36■□□□□ 0.05
TRIM28-203ENST00000593582 MACC1Q6ZN28 852 aa15.36■□□□□ 0.05
TRIM28-203ENST00000593582 PDCD6IPQ8WUM4 868 aaKnown RBP15.36■□□□□ 0.05
TRIM28-203ENST00000593582 SPOCK2Q92563 424 aa15.36■□□□□ 0.05
TRIM28-203ENST00000593582 SLC13A1Q9BZW2 595 aa15.36■□□□□ 0.05
TRIM28-203ENST00000593582 NOD2Q9HC29 1040 aa15.36■□□□□ 0.05
TRIM28-203ENST00000593582 HAUS2Q9NVX0 235 aa15.36■□□□□ 0.05
TRIM28-203ENST00000593582 KLF15Q9UIH9 416 aa15.36■□□□□ 0.05
TRIM28-203ENST00000593582 PCDHGC4Q9Y5F7 938 aa15.36■□□□□ 0.05
TRIM28-203ENST00000593582 CSNK1G3Q9Y6M4 447 aa15.36■□□□□ 0.05
TRIM28-203ENST00000593582 IGF2RP11717 2491 aa15.35■□□□□ 0.05
TRIM28-203ENST00000593582 FAM149AA5PLN7 773 aa15.35■□□□□ 0.05
TRIM28-203ENST00000593582 AQP9O43315 295 aa15.35■□□□□ 0.05
TRIM28-203ENST00000593582 HTRA2O43464 458 aaPredicted RBP15.35■□□□□ 0.05
TRIM28-203ENST00000593582 NEBLO76041 1014 aa15.35■□□□□ 0.05
TRIM28-203ENST00000593582 JUPP14923 745 aa15.35■□□□□ 0.05
TRIM28-203ENST00000593582 CR2P20023 1033 aa15.35■□□□□ 0.05
TRIM28-203ENST00000593582 HTR1BP28222 390 aa15.35■□□□□ 0.05
TRIM28-203ENST00000593582 PEX5P50542 639 aa15.35■□□□□ 0.05
TRIM28-203ENST00000593582 MAXP61244 160 aa15.35■□□□□ 0.05
TRIM28-203ENST00000593582 INPP5AQ14642 412 aa15.35■□□□□ 0.05
TRIM28-203ENST00000593582 TIGD7Q6NT04 549 aaPredicted RBP15.35■□□□□ 0.05
TRIM28-203ENST00000593582 DPPA4Q7L190 304 aa15.35■□□□□ 0.05
TRIM28-203ENST00000593582 PGBD5Q8N414 524 aa15.35■□□□□ 0.05
TRIM28-203ENST00000593582 LMX1AQ8TE12 382 aa15.35■□□□□ 0.05
TRIM28-203ENST00000593582 RFFLQ8WZ73 363 aa15.35■□□□□ 0.05
TRIM28-203ENST00000593582 FAF2Q96CS3 445 aa15.35■□□□□ 0.05
TRIM28-203ENST00000593582 NSMCE3Q96MG7 304 aa15.35■□□□□ 0.05
TRIM28-203ENST00000593582 CAAP1Q9H8G2 361 aa15.35■□□□□ 0.05
TRIM28-203ENST00000593582 NT5MQ9NPB1 228 aa15.35■□□□□ 0.05
TRIM28-203ENST00000593582 EVA1BQ9NVM1 165 aa15.35■□□□□ 0.05
TRIM28-203ENST00000593582 SPASTQ9UBP0 616 aa15.35■□□□□ 0.05
TRIM28-203ENST00000593582 APOBEC3BQ9UH17 382 aaKnown RBP15.35■□□□□ 0.05
TRIM28-203ENST00000593582 INTUQ9ULD6 942 aa15.35■□□□□ 0.05
TRIM28-203ENST00000593582 CACNA1BQ00975 2339 aa15.34■□□□□ 0.05
TRIM28-203ENST00000593582 K7ESM1 405 aa15.34■□□□□ 0.05
TRIM28-203ENST00000593582 RECQL5O94762 991 aaPredicted RBP15.34■□□□□ 0.05
TRIM28-203ENST00000593582 MTA2O94776 668 aa15.34■□□□□ 0.05
TRIM28-203ENST00000593582 PCCBP05166 539 aa15.34■□□□□ 0.05
TRIM28-203ENST00000593582 GIMD1P0DJR0 217 aa15.34■□□□□ 0.05
TRIM28-203ENST00000593582 CKMT1AP12532 417 aa15.34■□□□□ 0.05
TRIM28-203ENST00000593582 MX2P20592 715 aa15.34■□□□□ 0.05
TRIM28-203ENST00000593582 KDELR1P24390 212 aa15.34■□□□□ 0.05
TRIM28-203ENST00000593582 BLKP51451 505 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms