RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 FIS1Q9Y3D6 152 aa14.96□□□□□ -0.02
SMARCA4-219ENST00000592604 MYLKQ15746 1914 aa14.96□□□□□ -0.02
SMARCA4-219ENST00000592604 hCG_2014768A0A024R1R8 64 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 MT-CYBP00156 380 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 HSPA8P11142 646 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 ARSAP15289 507 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 NELFEP18615 380 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 ADRA1AP35348 466 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 BTBD8Q5XKL5 378 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 KIAA0930Q6ICG6 404 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 CROCCP3Q8IVE0 287 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 OR2T34Q8NGX1 318 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 OR2T3Q8NH03 318 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 USP33Q8TEY7 942 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 CELF6Q96J87 481 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 TCF12Q99081 682 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 TKTL2Q9H0I9 626 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 LIN28AQ9H9Z2 209 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 SLC2A6Q9UGQ3 507 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 ZNHIT2Q9UHR6 403 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 TRIM64A6NGJ6 449 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 ZNF701M0R085 212 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 DARSP14868 501 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 CPB1P15086 417 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 CKMT2P17540 419 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 AXLP30530 894 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 CA8P35219 290 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 SLC12A2P55011 1212 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 CSHL1Q14406 222 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 AGAP9Q5VTM2 703 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 KIAA0408Q6ZU52 694 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 LARP4Q71RC2 724 aaKnown RBP eCLIP14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 SAPCD2Q86UD0 394 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 BBS5Q8N3I7 341 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 SHCBP1Q8NEM2 672 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 ROPN1LQ96C74 230 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 OSMRQ99650 979 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 IL12RB2Q99665 862 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 SMOQ99835 787 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 RHOBTB2Q9BYZ6 727 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 UPF3AQ9H1J1 476 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 RNF39Q9H2S5 420 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 GLOD4Q9HC38 313 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 CHST12Q9NRB3 414 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 CCM2LQ9NUG4 571 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 CROCCQ5TZA2 2017 aa14.95□□□□□ -0.02
SMARCA4-219ENST00000592604 SOCS2O14508 198 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 TIPRLO75663 272 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 HOXD8P13378 290 aaPredicted RBP14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 PAMP19021 973 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 ADCYAP1R1P41586 468 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 GJA8P48165 433 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 NUP107P57740 925 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 FOXD4Q12950 439 aaPredicted RBP14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 INTS11Q5TA45 600 aaKnown RBP14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 WSCD1Q658N2 575 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 KLHL35Q6PF15 583 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 ERO1BQ86YB8 467 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 LRRC43Q8N309 656 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 FNDC8Q8TC99 324 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 CANT1Q8WVQ1 401 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 PPWD1Q96BP3 646 aaKnown RBP14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 FAM49AQ9H0Q0 323 aaPredicted RBP14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 CRTAC1Q9NQ79 661 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 RHBDL2Q9NX52 303 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 MTF2Q9Y483 593 aaPredicted RBP14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 A0A087WXM4 84 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 RRN3P2A6NIE6 340 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 STAMBPO95630 424 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 RBP1P09455 135 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 LRPAP1P30533 357 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 SLC7A2P52569 658 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 SLC14A2Q15849 920 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 ZNF792Q3KQV3 632 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 ZNF470Q6ECI4 717 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 CYHR1Q6ZMK1 362 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 GPRIN1Q7Z2K8 1008 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 FAM47BQ8NA70 645 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 ZMIZ2Q8NF64 920 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 IPMKQ8NFU5 416 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 FICDQ9BVA6 458 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 CYP4F12Q9HCS2 524 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 ENTPD7Q9NQZ7 604 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 TRAF6Q9Y4K3 522 aa14.94□□□□□ -0.02
SMARCA4-219ENST00000592604 ZNF839A8K0R7 811 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 DLGAP1O14490 977 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 LTA4HP09960 611 aaKnown RBP14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 USP17L7P0C7H9 530 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 RABGGTBP53611 331 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 GEMP55040 296 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 ZBED5Q49AG3 693 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 ARHGAP36Q6ZRI8 547 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 BHLHA9Q7RTU4 235 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 SLC22A9Q8IVM8 553 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 FUNDC1Q8IVP5 155 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 GPATCH1Q9BRR8 931 aaKnown RBP14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 TRMOQ9BU70 441 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 KATNBL1Q9H079 304 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 KCNH4Q9UQ05 1017 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 AQP12BA6NM10 295 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms