RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 ZNF235Q14590 738 aa13.98□□□□□ -0.17
APOC1-208ENST00000592535 WSCD2Q2TBF2 565 aa13.98□□□□□ -0.17
APOC1-208ENST00000592535 TMPRSS12Q86WS5 348 aa13.98□□□□□ -0.17
APOC1-208ENST00000592535 ATPAF2Q8N5M1 289 aa13.98□□□□□ -0.17
APOC1-208ENST00000592535 PAF1Q8N7H5 531 aa13.98□□□□□ -0.17
APOC1-208ENST00000592535 ZNF548Q8NEK5 533 aaPredicted RBP13.98□□□□□ -0.17
APOC1-208ENST00000592535 ZNHIT6Q9NWK9 470 aaKnown RBP13.98□□□□□ -0.17
APOC1-208ENST00000592535 NLGN3Q9NZ94 848 aa13.98□□□□□ -0.17
APOC1-208ENST00000592535 PNMA8BQ9ULN7 279 aaPredicted RBP13.98□□□□□ -0.17
APOC1-208ENST00000592535 KNTC1P50748 2209 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 SRRM3A6NNA2 597 aaPredicted RBP13.97□□□□□ -0.17
APOC1-208ENST00000592535 TMEM110-MUSTN1A8MSY1 372 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 H3BM21 787 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 TAF4O00268 1085 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 SCAMP1O15126 338 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 MFSD11O43934 449 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 TPM1P09493 284 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 TMEM253P0C7T8 217 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 CDK4P11802 303 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 MYF5P13349 255 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 JUNDP17535 347 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 CR2P20023 1033 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 HSPA9P38646 679 aaKnown RBP13.97□□□□□ -0.17
APOC1-208ENST00000592535 YPEL5P62699 121 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 DAB2P98082 770 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 ILKQ13418 452 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 CAMK2BQ13554 666 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 PTK2BQ14289 1009 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 LRRC14Q15048 493 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 TSR1Q2NL82 804 aaKnown RBP13.97□□□□□ -0.17
APOC1-208ENST00000592535 HS1BP3Q53T59 392 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 HES3Q5TGS1 186 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 NCBP2-AS2Q69YL0 99 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 RBFAQ8N0V3 343 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 PCDH19Q8TAB3 1148 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 MDM1Q8TC05 714 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 MGME1Q9BQP7 344 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 TCEAL2Q9H3H9 227 aaPredicted RBP13.97□□□□□ -0.17
APOC1-208ENST00000592535 CCDC86Q9H6F5 360 aaKnown RBP13.97□□□□□ -0.17
APOC1-208ENST00000592535 SPTLC3Q9NUV7 552 aa13.97□□□□□ -0.17
APOC1-208ENST00000592535 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.96□□□□□ -0.17
APOC1-208ENST00000592535 TRABD2BA6NFA1 517 aa13.96□□□□□ -0.17
APOC1-208ENST00000592535 NEMP2A6NFY4 417 aa13.96□□□□□ -0.17
APOC1-208ENST00000592535 K7ESM1 405 aa13.96□□□□□ -0.17
APOC1-208ENST00000592535 TOR1BO14657 336 aa13.96□□□□□ -0.17
APOC1-208ENST00000592535 AQP9O43315 295 aa13.96□□□□□ -0.17
APOC1-208ENST00000592535 LZTS3O60299 673 aaPredicted RBP13.96□□□□□ -0.17
APOC1-208ENST00000592535 ALPPL2P10696 532 aa13.96□□□□□ -0.17
APOC1-208ENST00000592535 MMP13P45452 471 aa13.96□□□□□ -0.17
APOC1-208ENST00000592535 MAXP61244 160 aa13.96□□□□□ -0.17
APOC1-208ENST00000592535 AGERQ15109 404 aa13.96□□□□□ -0.17
APOC1-208ENST00000592535 ANKRD20A8PQ5CZ79 823 aa13.96□□□□□ -0.17
APOC1-208ENST00000592535 MACC1Q6ZN28 852 aa13.96□□□□□ -0.17
APOC1-208ENST00000592535 DPPA4Q7L190 304 aa13.96□□□□□ -0.17
APOC1-208ENST00000592535 PROSER1Q86XN7 944 aa13.96□□□□□ -0.17
APOC1-208ENST00000592535 PHACTR4Q8IZ21 702 aa13.96□□□□□ -0.17
APOC1-208ENST00000592535 KCTD6Q8NC69 237 aa13.96□□□□□ -0.17
APOC1-208ENST00000592535 LMX1AQ8TE12 382 aa13.96□□□□□ -0.17
APOC1-208ENST00000592535 NSMCE1Q8WV22 266 aa13.96□□□□□ -0.17
APOC1-208ENST00000592535 APOLD1Q96LR9 279 aa13.96□□□□□ -0.17
APOC1-208ENST00000592535 NUDCD1Q96RS6 583 aa13.96□□□□□ -0.17
APOC1-208ENST00000592535 NHEJ1Q9H9Q4 299 aaPredicted RBP13.96□□□□□ -0.17
APOC1-208ENST00000592535 SCUBE2Q9NQ36 999 aa13.96□□□□□ -0.17
APOC1-208ENST00000592535 APOBEC3BQ9UH17 382 aaKnown RBP13.96□□□□□ -0.17
APOC1-208ENST00000592535 PCDHGC4Q9Y5F7 938 aa13.96□□□□□ -0.17
APOC1-208ENST00000592535 CSNK1G3Q9Y6M4 447 aa13.96□□□□□ -0.17
APOC1-208ENST00000592535 LY6G6EA0A0G2JKS1 128 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 CFAP69A5D8W1 941 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 A8MX80 341 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 HTRA2O43464 458 aaPredicted RBP13.95□□□□□ -0.18
APOC1-208ENST00000592535 MAP3K6O95382 1288 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 PCCBP05166 539 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 KRT7P08729 469 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 CKMT1AP12532 417 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 JUPP14923 745 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 MAN1A1P33908 653 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 HNF1BP35680 557 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 POLR2LP62875 67 aaKnown RBP13.95□□□□□ -0.18
APOC1-208ENST00000592535 GALNT2Q10471 571 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 TRAF2Q12933 501 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 C1orf61Q13536 156 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 MESDQ14696 234 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 PAFAH1B3Q15102 231 aaKnown RBP13.95□□□□□ -0.18
APOC1-208ENST00000592535 PDK2Q15119 407 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 DEFB133Q30KQ1 61 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 MARC1Q5VT66 337 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 LIPIQ6XZB0 460 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 NYAP1Q6ZVC0 841 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 BBS5Q8N3I7 341 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 SLC35G2Q8TBE7 412 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 PDCD6IPQ8WUM4 868 aaKnown RBP13.95□□□□□ -0.18
APOC1-208ENST00000592535 BTN2A2Q8WVV5 523 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 CCDC42Q96M95 316 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 ZNF670Q9BS34 389 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 LRRC61Q9BV99 259 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 DUSP23Q9BVJ7 150 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 NOD2Q9HC29 1040 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 B4GALT6Q9UBX8 382 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 LCMT1Q9UIC8 334 aa13.95□□□□□ -0.18
APOC1-208ENST00000592535 U3KQA8 63 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms