RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	INPP5A	Q14642	412 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	AGER	Q15109	404 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	CYTH1	Q15438	398 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	INO80D	Q53TQ3	878 aa	Predicted RBP	18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	RD3	Q7Z3Z2	195 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	ZSWIM9	Q86XI8	627 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	JAML	Q86YT9	394 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	RTL3	Q8N8U3	475 aa	Known RBP	18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	MLKL	Q8NB16	471 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	PLA2G15	Q8NCC3	412 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	SLC30A5	Q8TAD4	765 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	FAM172A	Q8WUF8	416 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	NTAN1	Q96AB6	310 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	SGF29	Q96ES7	293 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	HMCES	Q96FZ2	354 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	RBM15	Q96T37	977 aa	Known RBP eCLIP	18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	C11orf70	Q9BRQ4	267 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	PCDH12	Q9NPG4	1184 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	STARD5	Q9NSY2	213 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	PISD	Q9UG56	409 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	ANKRD36	A6QL64	1941 aa		18.44	■□□□□ 0.54
CIRBP-238	ENST00000592412	TMEM110-MUSTN1	A8MSY1	372 aa		18.43	■□□□□ 0.54
CIRBP-238	ENST00000592412	TERT	O14746	1132 aa	Known RBP	18.43	■□□□□ 0.54
CIRBP-238	ENST00000592412	NVL	O15381	856 aa	Known RBP	18.43	■□□□□ 0.54
CIRBP-238	ENST00000592412	WT1	P19544	449 aa	Predicted RBP	18.43	■□□□□ 0.54
CIRBP-238	ENST00000592412	UGP2	Q16851	508 aa		18.43	■□□□□ 0.54
CIRBP-238	ENST00000592412	GKN2	Q86XP6	184 aa		18.43	■□□□□ 0.54
CIRBP-238	ENST00000592412	SCG3	Q8WXD2	468 aa	Known RBP	18.43	■□□□□ 0.54
CIRBP-238	ENST00000592412	CASKIN2	Q8WXE0	1202 aa		18.43	■□□□□ 0.54
CIRBP-238	ENST00000592412	STRADB	Q9C0K7	418 aa		18.43	■□□□□ 0.54
CIRBP-238	ENST00000592412	GAN	Q9H2C0	597 aa		18.43	■□□□□ 0.54
CIRBP-238	ENST00000592412	WDR70	Q9NW82	654 aa		18.43	■□□□□ 0.54
CIRBP-238	ENST00000592412	KL	Q9UEF7	1012 aa		18.43	■□□□□ 0.54
CIRBP-238	ENST00000592412	APPL1	Q9UKG1	709 aa		18.43	■□□□□ 0.54
CIRBP-238	ENST00000592412	LOXL2	Q9Y4K0	774 aa		18.43	■□□□□ 0.54
CIRBP-238	ENST00000592412	UNC13C	Q8NB66	2214 aa		18.43	■□□□□ 0.54
CIRBP-238	ENST00000592412	PRAMEF33	A0A0G2JMD5	474 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	RASA4B	C9J798	803 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	TMX2-CTNND1	H3BSU7	103 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	AGRP	O00253	132 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	RASA4	O43374	803 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	BUB1B	O60566	1050 aa	Predicted RBP	18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	PRAMEF10	O60809	474 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	PRKCG	P05129	697 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	LIPC	P11150	499 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	RFC1	P35251	1148 aa	Predicted RBP	18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	MMP12	P39900	470 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	LIG3	P49916	1009 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	CSRP3	P50461	194 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	CDR2	Q01850	454 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	RAD51	Q06609	339 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	ELP6	Q0PNE2	266 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	SERINC3	Q13530	473 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	TPD52L1	Q16890	204 aa	Predicted RBP	18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	DPCR1	Q3MIW9	517 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	CERCAM	Q5T4B2	595 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	OGFOD3	Q6PK18	319 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	USP53	Q70EK8	1073 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	VASH2	Q86V25	355 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	ZNF677	Q86XU0	584 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	ZNF354C	Q86Y25	554 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	CCNJL	Q8IV13	435 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	OR1E3	Q8WZA6	343 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	WDR92	Q96MX6	357 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	TMEM74	Q96NL1	305 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	PDF	Q9HBH1	243 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	FOXJ2	Q9P0K8	574 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	DGKB	Q9Y6T7	804 aa		18.42	■□□□□ 0.54
CIRBP-238	ENST00000592412	TMEM202	A6NGA9	273 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	GFPT2	O94808	682 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	ITGB2	P05107	769 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	PCCB	P05166	539 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	JMJD7	P0C870	316 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	UNG	P13051	313 aa	Predicted RBP	18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	HTR1B	P28222	390 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	EPHB2	P29323	1055 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	KLK7	P49862	253 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	SUOX	P51687	545 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	SPRED1	Q7Z699	444 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	ZFAND4	Q86XD8	727 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	DTX1	Q86Y01	620 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	SLITRK4	Q8IW52	837 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	FAM114A1	Q8IWE2	563 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412		Q8N9G6	341 aa	Predicted RBP	18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	OR6C4	Q8NGE1	309 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	HCAR2	Q8TDS4	363 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	HTR3C	Q8WXA8	447 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	PCDHB18P	Q96TA0	734 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	SUV39H2	Q9H5I1	410 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	FGF22	Q9HCT0	170 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	MRPL40	Q9NQ50	206 aa	Known RBP	18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	SAMSN1	Q9NSI8	373 aa	Known RBP	18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	IL17B	Q9UHF5	180 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	DAAM1	Q9Y4D1	1078 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	PCDHGA4	Q9Y5G9	962 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	RNF215	Q9Y6U7	377 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	LRRK2	Q5S007	2527 aa		18.41	■□□□□ 0.54
CIRBP-238	ENST00000592412	WASH4P	A8MWX3	477 aa		18.4	■□□□□ 0.54
CIRBP-238	ENST00000592412	C9orf172	C9J069	976 aa		18.4	■□□□□ 0.54
CIRBP-238	ENST00000592412	FAM87A	P0C7U9	286 aa		18.4	■□□□□ 0.54

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