RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 PNPLA1Q8N8W4 532 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 PEX13Q92968 403 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 TSPAN17Q96FV3 270 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 ANKRD27Q96NW4 1050 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 TRIB3Q96RU7 358 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 THTPAQ9BU02 230 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 SLC7A8Q9UHI5 535 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 ACTL7AQ9Y615 435 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 A0A088AWK7 358 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 OR51F1A6NGY5 319 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 F8W8V4 182 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 COCHO43405 550 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 DCXO43602 365 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 ATP5F1P24539 256 aaPredicted RBP15.84■□□□□ 0.13
MBD1-227ENST00000592060 GCKP35557 465 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 SLC11A2P49281 568 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 CCL23P55773 120 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 KLF10Q13118 480 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 TRMT5Q32P41 509 aaKnown RBP15.84■□□□□ 0.13
MBD1-227ENST00000592060 HECTD3Q5T447 861 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 PLD4Q96BZ4 506 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 IFT43Q96FT9 208 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 UBXN10Q96LJ8 280 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 ZNF512Q96ME7 567 aaPredicted RBP15.84■□□□□ 0.13
MBD1-227ENST00000592060 PANX3Q96QZ0 392 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 ZNF385DQ9H6B1 395 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 VTI1BQ9UEU0 232 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 AFF4Q9UHB7 1163 aaKnown RBP15.84■□□□□ 0.13
MBD1-227ENST00000592060 SLCO1B7G3V0H7 640 aa15.83■□□□□ 0.12
MBD1-227ENST00000592060 KLKB1P03952 638 aa15.83■□□□□ 0.12
MBD1-227ENST00000592060 LTA4HP09960 611 aaKnown RBP15.83■□□□□ 0.12
MBD1-227ENST00000592060 TFEBP19484 476 aa15.83■□□□□ 0.12
MBD1-227ENST00000592060 PTDSS1P48651 473 aaKnown RBP15.83■□□□□ 0.12
MBD1-227ENST00000592060 RPS24P62847 133 aaKnown RBP15.83■□□□□ 0.12
MBD1-227ENST00000592060 PRAMEP78395 509 aa15.83■□□□□ 0.12
MBD1-227ENST00000592060 SLC25A3Q00325 362 aa15.83■□□□□ 0.12
MBD1-227ENST00000592060 GALNT3Q14435 633 aa15.83■□□□□ 0.12
MBD1-227ENST00000592060 FAM83EQ2M2I3 478 aa15.83■□□□□ 0.12
MBD1-227ENST00000592060 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.83■□□□□ 0.12
MBD1-227ENST00000592060 LDB1Q86U70 411 aaPredicted RBP15.83■□□□□ 0.12
MBD1-227ENST00000592060 OR6P1Q8NGX9 317 aa15.83■□□□□ 0.12
MBD1-227ENST00000592060 CMTM5Q96DZ9 223 aa15.83■□□□□ 0.12
MBD1-227ENST00000592060 IGSF21Q96ID5 467 aa15.83■□□□□ 0.12
MBD1-227ENST00000592060 DNAJC1Q96KC8 554 aaKnown RBP15.83■□□□□ 0.12
MBD1-227ENST00000592060 NSMCE3Q96MG7 304 aa15.83■□□□□ 0.12
MBD1-227ENST00000592060 CLSTN3Q9BQT9 956 aa15.83■□□□□ 0.12
MBD1-227ENST00000592060 HIPK3Q9H422 1215 aa15.83■□□□□ 0.12
MBD1-227ENST00000592060 POMKQ9H5K3 350 aa15.83■□□□□ 0.12
MBD1-227ENST00000592060 WDR55Q9H6Y2 383 aaPredicted RBP15.83■□□□□ 0.12
MBD1-227ENST00000592060 PAK6Q9NQU5 681 aaPredicted RBP15.83■□□□□ 0.12
MBD1-227ENST00000592060 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.83■□□□□ 0.12
MBD1-227ENST00000592060 RIMKLBQ9ULI2 386 aa15.83■□□□□ 0.12
MBD1-227ENST00000592060 ARL5AQ9Y689 179 aa15.83■□□□□ 0.12
MBD1-227ENST00000592060 CIB2O75838 187 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 STC2O76061 302 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 SERPINF2P08697 491 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 RPSAP08865 295 aaKnown RBP15.82■□□□□ 0.12
MBD1-227ENST00000592060 MAP2K2P36507 400 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 SERPINB5P36952 375 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 ALDH7A1P49419 539 aaKnown RBP15.82■□□□□ 0.12
MBD1-227ENST00000592060 SGSHP51688 502 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 CDKN2DP55273 166 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 BTKQ06187 659 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 LAMB3Q13751 1172 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 ARHGEF6Q15052 776 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 LSM12Q3MHD2 195 aaKnown RBP15.82■□□□□ 0.12
MBD1-227ENST00000592060 AGAP9Q5VTM2 703 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 TMEM207Q6UWW9 146 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 RIPOR1Q6ZS17 1223 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 PIWIL4Q7Z3Z4 852 aaKnown RBP15.82■□□□□ 0.12
MBD1-227ENST00000592060 DENND1CQ8IV53 801 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 KDM1BQ8NB78 822 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 GPR150Q8NGU9 434 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 BLOC1S5Q8TDH9 187 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 ANKRD49Q8WVL7 239 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 SGF29Q96ES7 293 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 CNDP1Q96KN2 507 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 TBATAQ96M53 351 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 OSBPL1AQ9BXW6 950 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 GPAMQ9HCL2 828 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 SEPT3Q9UH03 358 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 VWA7Q9Y334 891 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 LRRC42Q9Y546 428 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 GOLGA8QA0A0J9YX86 632 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 GOLGA8OA6NCC3 632 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 NEMP2A6NFY4 417 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 GOLGA8NF8WBI6 632 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 KDELR3O43731 214 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 RPP40O75818 363 aaKnown RBP15.82■□□□□ 0.12
MBD1-227ENST00000592060 ABLIM3O94929 683 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 SNUPNO95149 360 aaKnown RBP15.82■□□□□ 0.12
MBD1-227ENST00000592060 NDST3O95803 873 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 GOT2P00505 430 aaKnown RBP15.82■□□□□ 0.12
MBD1-227ENST00000592060 JUNP05412 331 aaKnown RBP15.82■□□□□ 0.12
MBD1-227ENST00000592060 CCDC166P0CW27 439 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 COX4I1P13073 169 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 ITGAXP20702 1163 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 KCNA5P22460 613 aa15.82■□□□□ 0.12
MBD1-227ENST00000592060 CORO1AP31146 461 aaKnown RBP15.82■□□□□ 0.12
MBD1-227ENST00000592060 RGRP47804 291 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms