RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 A0A1W2PQU0 124 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 LRRD1A4D1F6 860 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 FIGNL2A6NMB9 653 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 RNF103O00237 685 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 NEMP1O14524 444 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 LATO43561 262 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 NDUFA10O95299 355 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 CER1O95813 267 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 PDGFAP04085 211 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 TNNT1P13805 278 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 XPAP23025 273 aaPredicted RBP10.49□□□□□ -0.73
SDF2-208ENST00000589788 IL4RP24394 825 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 MSX1P28360 303 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 SLC1A1P43005 524 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 RENBPP51606 427 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 ARSEP51690 589 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 TAGLNQ01995 201 aaKnown RBP10.49□□□□□ -0.73
SDF2-208ENST00000589788 ZNF235Q14590 738 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 TCEAL1Q15170 157 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 ANKRD20A8PQ5CZ79 823 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 ARHGAP36Q6ZRI8 547 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 PARS2Q7L3T8 475 aaKnown RBP10.49□□□□□ -0.73
SDF2-208ENST00000589788 ERMP1Q7Z2K6 904 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 LRRC49Q8IUZ0 686 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 TP53INP2Q8IXH6 220 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 BBS5Q8N3I7 341 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 PAF1Q8N7H5 531 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 OR2I1PQ8NGU4 316 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 RAB7BQ96AH8 199 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 FEM1CQ96JP0 617 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 SLC6A18Q96N87 628 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 KLHL32Q96NJ5 620 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 ZNF599Q96NL3 588 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 ORAI3Q9BRQ5 295 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 CPEB1Q9BZB8 566 aaKnown RBP10.49□□□□□ -0.73
SDF2-208ENST00000589788 TIMMDC1Q9NPL8 285 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 DMTF1Q9Y222 760 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 SLCO1B1Q9Y6L6 691 aa10.49□□□□□ -0.73
SDF2-208ENST00000589788 C16orf96A6NNT2 1141 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 VILLO15195 856 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 AP1G1O43747 822 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 KRT1P04264 644 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 COMTP21964 271 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 KDELR1P24390 212 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 CD38P28907 300 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 HADHBP55084 474 aaKnown RBP10.48□□□□□ -0.73
SDF2-208ENST00000589788 NAP1L1P55209 391 aaKnown RBP10.48□□□□□ -0.73
SDF2-208ENST00000589788 LBRQ14739 615 aaKnown RBP10.48□□□□□ -0.73
SDF2-208ENST00000589788 STAT4Q14765 748 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 LRRC38Q5VT99 294 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 NAPEPLDQ6IQ20 393 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 KIAA1161Q6NSJ0 714 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 LAYNQ6UX15 382 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 SRLQ86TD4 932 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 TTC7BQ86TV6 843 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 HORMAD1Q86X24 394 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 RHOT1Q8IXI2 618 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 PCDH19Q8TAB3 1148 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.48□□□□□ -0.73
SDF2-208ENST00000589788 RAPGEF5Q92565 580 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 KLK6Q92876 244 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 TUBGCP5Q96RT8 1024 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 MAK16Q9BXY0 300 aaKnown RBP10.48□□□□□ -0.73
SDF2-208ENST00000589788 GAREM1Q9H706 876 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 ATP13A3Q9H7F0 1226 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 EBF2Q9HAK2 575 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 DDX56Q9NY93 547 aaKnown RBP10.48□□□□□ -0.73
SDF2-208ENST00000589788 ANKRD6Q9Y2G4 727 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 ZKSCAN5Q9Y2L8 839 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 HYOU1Q9Y4L1 999 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 FADS3Q9Y5Q0 445 aa10.48□□□□□ -0.73
SDF2-208ENST00000589788 DOCK9Q9BZ29 2069 aa10.47□□□□□ -0.73
SDF2-208ENST00000589788 ASCC3Q8N3C0 2202 aaKnown RBP10.47□□□□□ -0.73
SDF2-208ENST00000589788 A0A0A6YYK5 440 aaPredicted RBP10.47□□□□□ -0.73
SDF2-208ENST00000589788 C10orf142B7Z368 130 aa10.47□□□□□ -0.73
SDF2-208ENST00000589788 PRAMEF26H0Y7S4 382 aa10.47□□□□□ -0.73
SDF2-208ENST00000589788 SLC31A1O15431 190 aa10.47□□□□□ -0.73
SDF2-208ENST00000589788 ST8SIA5O15466 376 aa10.47□□□□□ -0.73
SDF2-208ENST00000589788 INSIG1O15503 277 aa10.47□□□□□ -0.73
SDF2-208ENST00000589788 TSPAN6O43657 245 aa10.47□□□□□ -0.73
SDF2-208ENST00000589788 MFSD11O43934 449 aa10.47□□□□□ -0.73
SDF2-208ENST00000589788 BUB1BO60566 1050 aaPredicted RBP10.47□□□□□ -0.73
SDF2-208ENST00000589788 MAFKO60675 156 aa10.47□□□□□ -0.73
SDF2-208ENST00000589788 NEBLO76041 1014 aa10.47□□□□□ -0.73
SDF2-208ENST00000589788 PIGNO95427 931 aa10.47□□□□□ -0.73
SDF2-208ENST00000589788 PRLRP16471 622 aa10.47□□□□□ -0.73
SDF2-208ENST00000589788 SERPINA4P29622 427 aa10.47□□□□□ -0.73
SDF2-208ENST00000589788 AKT2P31751 481 aa10.47□□□□□ -0.73
SDF2-208ENST00000589788 HSPA9P38646 679 aaKnown RBP10.47□□□□□ -0.73
SDF2-208ENST00000589788 CSNK1DP48730 415 aa10.47□□□□□ -0.73
SDF2-208ENST00000589788 SCNN1BP51168 640 aa10.47□□□□□ -0.73
SDF2-208ENST00000589788 RPS21P63220 83 aaKnown RBP10.47□□□□□ -0.73
SDF2-208ENST00000589788 NSUN2Q08J23 767 aaKnown RBP eCLIP10.47□□□□□ -0.73
SDF2-208ENST00000589788 SLC10A7Q0GE19 358 aa10.47□□□□□ -0.73
SDF2-208ENST00000589788 PAFAH1B3Q15102 231 aaKnown RBP10.47□□□□□ -0.73
SDF2-208ENST00000589788 KIF19Q2TAC6 998 aa10.47□□□□□ -0.73
SDF2-208ENST00000589788 ZNF284Q2VY69 593 aa10.47□□□□□ -0.73
SDF2-208ENST00000589788 HLA-BQ31612 363 aa10.47□□□□□ -0.73
SDF2-208ENST00000589788 PPM1JQ5JR12 505 aa10.47□□□□□ -0.73
SDF2-208ENST00000589788 MARC1Q5VT66 337 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms