RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 CCDC15Q0P6D6 951 aa15.28■□□□□ 0.04
ATG4D-211ENST00000589753 CALCOCO2Q13137 446 aa15.28■□□□□ 0.04
ATG4D-211ENST00000589753 UGP2Q16851 508 aa15.28■□□□□ 0.04
ATG4D-211ENST00000589753 SIRPB2Q5JXA9 342 aa15.28■□□□□ 0.04
ATG4D-211ENST00000589753 ANKRD22Q5VYY1 191 aa15.28■□□□□ 0.04
ATG4D-211ENST00000589753 PPP1R21Q6ZMI0 780 aa15.28■□□□□ 0.04
ATG4D-211ENST00000589753 USP30Q70CQ3 517 aa15.28■□□□□ 0.04
ATG4D-211ENST00000589753 TTC7BQ86TV6 843 aa15.28■□□□□ 0.04
ATG4D-211ENST00000589753 HOOK3Q86VS8 718 aa15.28■□□□□ 0.04
ATG4D-211ENST00000589753 C1orf210Q8IVY1 113 aa15.28■□□□□ 0.04
ATG4D-211ENST00000589753 NDUFAF2Q8N183 169 aa15.28■□□□□ 0.04
ATG4D-211ENST00000589753 SLC25A41Q8N5S1 370 aa15.28■□□□□ 0.04
ATG4D-211ENST00000589753 NAT8LQ8N9F0 302 aa15.28■□□□□ 0.04
ATG4D-211ENST00000589753 DTWD2Q8NBA8 298 aa15.28■□□□□ 0.04
ATG4D-211ENST00000589753 HINFPQ9BQA5 517 aa15.28■□□□□ 0.04
ATG4D-211ENST00000589753 RHOXF2Q9BQY4 288 aa15.28■□□□□ 0.04
ATG4D-211ENST00000589753 PRMT8Q9NR22 394 aaPredicted RBP15.28■□□□□ 0.04
ATG4D-211ENST00000589753 FBXL12Q9NXK8 326 aa15.28■□□□□ 0.04
ATG4D-211ENST00000589753 WHRNQ9P202 907 aa15.28■□□□□ 0.04
ATG4D-211ENST00000589753 EBF1Q9UH73 591 aa15.28■□□□□ 0.04
ATG4D-211ENST00000589753 DMGDHQ9UI17 866 aaKnown RBP15.28■□□□□ 0.04
ATG4D-211ENST00000589753 NCKAP1Q9Y2A7 1128 aa15.28■□□□□ 0.04
ATG4D-211ENST00000589753 A0A0C4DFX4 3053 aa15.28■□□□□ 0.04
ATG4D-211ENST00000589753 TRIOO75962 3097 aa15.28■□□□□ 0.04
ATG4D-211ENST00000589753 VCANP13611 3396 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 SMAPO00193 183 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 TMEM63AO94886 807 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 FGF1P05230 155 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 ADRB3P13945 408 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 NFKBIAP25963 317 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 AVPR2P30518 371 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 CHRNA4P43681 627 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 SUOXP51687 545 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 ITGA8P53708 1063 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 DRG2P55039 364 aaKnown RBP15.27■□□□□ 0.04
ATG4D-211ENST00000589753 MORF4L2Q15014 288 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 QPCTQ16769 361 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 PIP5KL1Q5T9C9 394 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 HIBCHQ6NVY1 386 aaPredicted RBP15.27■□□□□ 0.04
ATG4D-211ENST00000589753 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.27■□□□□ 0.04
ATG4D-211ENST00000589753 KBTBD6Q86V97 674 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 MCUQ8NE86 351 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 SEC14L1Q92503 715 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 ARNT2Q9HBZ2 717 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 EPB41L5Q9HCM4 733 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 C11orf16Q9NQ32 467 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 ITM2CQ9NQX7 267 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 USP36Q9P275 1121 aaKnown RBP15.27■□□□□ 0.04
ATG4D-211ENST00000589753 SERGEFQ9UGK8 458 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 ANAPC5Q9UJX4 755 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 FZD4Q9ULV1 537 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 PPIL1Q9Y3C6 166 aa15.27■□□□□ 0.04
ATG4D-211ENST00000589753 A0A0J9YYE9 177 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 ESYT3A0FGR9 886 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 BHMG1C9JSJ3 638 aaPredicted RBP15.26■□□□□ 0.03
ATG4D-211ENST00000589753 GOLGA8MH3BSY2 632 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 SLC7A4O43246 635 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 GPR37L1O60883 481 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 ZNF217O75362 1048 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 TRBC1P01850 177 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 CTPS1P17812 591 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 GRIA1P42261 906 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 ABL2P42684 1182 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 PXNP49023 591 aaPredicted RBP15.26■□□□□ 0.03
ATG4D-211ENST00000589753 TPMTP51580 245 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 CDH17Q12864 832 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 LRRC73Q5JTD7 316 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 AGBL4Q5VU57 503 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 DENND5AQ6IQ26 1287 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 ERAP2Q6P179 960 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 LRRC8BQ6P9F7 803 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 USP45Q70EL2 814 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 DNAAF3Q8N9W5 541 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 OR52K1Q8NGK4 314 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 RAB7BQ96AH8 199 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 FAM131CQ96AQ9 280 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 SCRN2Q96FV2 425 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 TPSD1Q9BZJ3 242 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 NEUROG2Q9H2A3 272 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 PCDH12Q9NPG4 1184 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 CASS4Q9NQ75 786 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 FAM114A2Q9NRY5 505 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 GRHL1Q9NZI5 618 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 SHOC2Q9UQ13 582 aa15.26■□□□□ 0.03
ATG4D-211ENST00000589753 PRR33A8MZF0 331 aa15.25■□□□□ 0.03
ATG4D-211ENST00000589753 AP3B1O00203 1094 aa15.25■□□□□ 0.03
ATG4D-211ENST00000589753 AXIN1O15169 862 aa15.25■□□□□ 0.03
ATG4D-211ENST00000589753 PRKCGP05129 697 aa15.25■□□□□ 0.03
ATG4D-211ENST00000589753 ALPIP09923 528 aa15.25■□□□□ 0.03
ATG4D-211ENST00000589753 CYP2A6P11509 494 aaPredicted RBP15.25■□□□□ 0.03
ATG4D-211ENST00000589753 HOXA6P31267 233 aa15.25■□□□□ 0.03
ATG4D-211ENST00000589753 HNF1BP35680 557 aa15.25■□□□□ 0.03
ATG4D-211ENST00000589753 FAM193AP78312 1265 aa15.25■□□□□ 0.03
ATG4D-211ENST00000589753 CAV1Q03135 178 aa15.25■□□□□ 0.03
ATG4D-211ENST00000589753 ELP6Q0PNE2 266 aa15.25■□□□□ 0.03
ATG4D-211ENST00000589753 TRADDQ15628 312 aa15.25■□□□□ 0.03
ATG4D-211ENST00000589753 TSSK4Q6SA08 328 aa15.25■□□□□ 0.03
ATG4D-211ENST00000589753 ZNF534Q76KX8 674 aa15.25■□□□□ 0.03
ATG4D-211ENST00000589753 FAM124AQ86V42 546 aa15.25■□□□□ 0.03
ATG4D-211ENST00000589753 SMIM14Q96QK8 99 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms