RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 CCDC13Q8IYE1 715 aa17.03■□□□□ 0.32
H3F3B-208ENST00000589599 RCOR2Q8IZ40 523 aa17.03■□□□□ 0.32
H3F3B-208ENST00000589599 PLD5Q8N7P1 536 aa17.03■□□□□ 0.32
H3F3B-208ENST00000589599 TPCN2Q8NHX9 752 aa17.03■□□□□ 0.32
H3F3B-208ENST00000589599 PDCD6IPQ8WUM4 868 aaKnown RBP17.03■□□□□ 0.32
H3F3B-208ENST00000589599 HDAC11Q96DB2 347 aa17.03■□□□□ 0.32
H3F3B-208ENST00000589599 KLF6Q99612 283 aaPredicted RBP17.03■□□□□ 0.32
H3F3B-208ENST00000589599 SEMA3CQ99985 751 aa17.03■□□□□ 0.32
H3F3B-208ENST00000589599 KNL1Q8NG31 2342 aa17.03■□□□□ 0.32
H3F3B-208ENST00000589599 NCOR2Q9Y618 2525 aa17.03■□□□□ 0.32
H3F3B-208ENST00000589599 POM121BA6NF01 834 aa17.02■□□□□ 0.32
H3F3B-208ENST00000589599 BTNL10A8MVZ5 291 aa17.02■□□□□ 0.32
H3F3B-208ENST00000589599 TRAFD1O14545 582 aaPredicted RBP17.02■□□□□ 0.32
H3F3B-208ENST00000589599 HTRA2O43464 458 aaPredicted RBP17.02■□□□□ 0.32
H3F3B-208ENST00000589599 CBFA2T3O75081 653 aa17.02■□□□□ 0.32
H3F3B-208ENST00000589599 KRT10P13645 584 aa17.02■□□□□ 0.32
H3F3B-208ENST00000589599 MMP12P39900 470 aa17.02■□□□□ 0.32
H3F3B-208ENST00000589599 LIG3P49916 1009 aa17.02■□□□□ 0.32
H3F3B-208ENST00000589599 VAV2P52735 878 aa17.02■□□□□ 0.32
H3F3B-208ENST00000589599 SHBQ15464 509 aa17.02■□□□□ 0.32
H3F3B-208ENST00000589599 MFSD7Q6UXD7 560 aa17.02■□□□□ 0.32
H3F3B-208ENST00000589599 KATNAL2Q8IYT4 538 aa17.02■□□□□ 0.32
H3F3B-208ENST00000589599 NDUFAF2Q8N183 169 aa17.02■□□□□ 0.32
H3F3B-208ENST00000589599 SAP25Q8TEE9 199 aa17.02■□□□□ 0.32
H3F3B-208ENST00000589599 CENPTQ96BT3 561 aa17.02■□□□□ 0.32
H3F3B-208ENST00000589599 IFT43Q96FT9 208 aa17.02■□□□□ 0.32
H3F3B-208ENST00000589599 BRD8Q9H0E9 1235 aa17.02■□□□□ 0.32
H3F3B-208ENST00000589599 TTLL3Q9Y4R7 772 aa17.02■□□□□ 0.32
H3F3B-208ENST00000589599 PLXNA2O75051 1894 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 RCCD1A6NED2 376 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 TOR1BO14657 336 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 PPP1R12AO14974 1030 aaPredicted RBP17.01■□□□□ 0.31
H3F3B-208ENST00000589599 TRIM16O95361 564 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 CPP00450 1065 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 PRKCGP05129 697 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 EPHA8P29322 1005 aaPredicted RBP17.01■□□□□ 0.31
H3F3B-208ENST00000589599 CDKN2BP42772 138 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 NR2C2P49116 596 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 GSDMDP57764 484 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 DYNLT1P63172 113 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 KIF5AQ12840 1032 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 LRRC14Q15048 493 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 ARMC12Q5T9G4 340 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 SPOCD1Q6ZMY3 1216 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 GLRX5Q86SX6 157 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 GATAD2AQ86YP4 633 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 ACRBPQ8NEB7 543 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 KIAA1524Q8TCG1 905 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 SPOCK2Q92563 424 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 RBM41Q96IZ5 413 aaKnown RBP17.01■□□□□ 0.31
H3F3B-208ENST00000589599 LGMNQ99538 433 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 GOLPH3Q9H4A6 298 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 PHTF1Q9UMS5 762 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 APOBEC2Q9Y235 224 aaKnown RBP17.01■□□□□ 0.31
H3F3B-208ENST00000589599 BTBD3Q9Y2F9 522 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 REXO2Q9Y3B8 237 aaKnown RBP17.01■□□□□ 0.31
H3F3B-208ENST00000589599 RAI2Q9Y5P3 530 aa17.01■□□□□ 0.31
H3F3B-208ENST00000589599 PJA2O43164 708 aa17■□□□□ 0.31
H3F3B-208ENST00000589599 JCHAINP01591 159 aa17■□□□□ 0.31
H3F3B-208ENST00000589599 C6P13671 934 aa17■□□□□ 0.31
H3F3B-208ENST00000589599 CA4P22748 312 aa17■□□□□ 0.31
H3F3B-208ENST00000589599 THOP1P52888 689 aa17■□□□□ 0.31
H3F3B-208ENST00000589599 YPEL5P62699 121 aa17■□□□□ 0.31
H3F3B-208ENST00000589599 SEMG2Q02383 582 aa17■□□□□ 0.31
H3F3B-208ENST00000589599 PPIDQ08752 370 aaKnown RBP17■□□□□ 0.31
H3F3B-208ENST00000589599 AP1B1Q10567 949 aa17■□□□□ 0.31
H3F3B-208ENST00000589599 FOXC1Q12948 553 aa17■□□□□ 0.31
H3F3B-208ENST00000589599 BNIP3Q12983 259 aa17■□□□□ 0.31
H3F3B-208ENST00000589599 PTK2BQ14289 1009 aa17■□□□□ 0.31
H3F3B-208ENST00000589599 TAZQ16635 292 aa17■□□□□ 0.31
H3F3B-208ENST00000589599 TFDP3Q5H9I0 405 aa17■□□□□ 0.31
H3F3B-208ENST00000589599 DPPA4Q7L190 304 aa17■□□□□ 0.31
H3F3B-208ENST00000589599 CCDC50Q8IVM0 306 aa17■□□□□ 0.31
H3F3B-208ENST00000589599 EXD1Q8NHP7 514 aa17■□□□□ 0.31
H3F3B-208ENST00000589599 NSMCE3Q96MG7 304 aa17■□□□□ 0.31
H3F3B-208ENST00000589599 FTSJ1Q9UET6 329 aa17■□□□□ 0.31
H3F3B-208ENST00000589599 SALL4Q9UJQ4 1053 aa17■□□□□ 0.31
H3F3B-208ENST00000589599 ANGPTL2Q9UKU9 493 aa17■□□□□ 0.31
H3F3B-208ENST00000589599 DUSP10Q9Y6W6 482 aa17■□□□□ 0.31
H3F3B-208ENST00000589599 SPTY2D1-AS1A0A0U1RR47 76 aa16.99■□□□□ 0.31
H3F3B-208ENST00000589599 TNFSF14O43557 240 aa16.99■□□□□ 0.31
H3F3B-208ENST00000589599 CST8O60676 142 aa16.99■□□□□ 0.31
H3F3B-208ENST00000589599 PGLSO95336 258 aa16.99■□□□□ 0.31
H3F3B-208ENST00000589599 ELFN1P0C7U0 828 aa16.99■□□□□ 0.31
H3F3B-208ENST00000589599 CYP2A6P11509 494 aaPredicted RBP16.99■□□□□ 0.31
H3F3B-208ENST00000589599 PMLP29590 882 aa16.99■□□□□ 0.31
H3F3B-208ENST00000589599 PFN3P60673 137 aa16.99■□□□□ 0.31
H3F3B-208ENST00000589599 IFI35P80217 286 aaPredicted RBP16.99■□□□□ 0.31
H3F3B-208ENST00000589599 TRAF2Q12933 501 aa16.99■□□□□ 0.31
H3F3B-208ENST00000589599 PDE1CQ14123 709 aaPredicted RBP16.99■□□□□ 0.31
H3F3B-208ENST00000589599 KAZNQ674X7 775 aa16.99■□□□□ 0.31
H3F3B-208ENST00000589599 TMEM139Q8IV31 216 aa16.99■□□□□ 0.31
H3F3B-208ENST00000589599 SLC22A18ASQ8N1D0 253 aa16.99■□□□□ 0.31
H3F3B-208ENST00000589599 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.99■□□□□ 0.31
H3F3B-208ENST00000589599 EID2Q8N6I1 236 aa16.99■□□□□ 0.31
H3F3B-208ENST00000589599 TP53I13Q8NBR0 393 aaPredicted RBP16.99■□□□□ 0.31
H3F3B-208ENST00000589599 BAHD1Q8TBE0 780 aaPredicted RBP16.99■□□□□ 0.31
H3F3B-208ENST00000589599 LRRN4Q8WUT4 740 aa16.99■□□□□ 0.31
H3F3B-208ENST00000589599 LACRTQ9GZZ8 138 aa16.99■□□□□ 0.31
H3F3B-208ENST00000589599 MBNL1Q9NR56 388 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms