RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 ZSCAN30Q86W11 494 aa15.22■□□□□ 0.03
SF3A2-204ENST00000589118 NLRP14Q86W24 1093 aa15.22■□□□□ 0.03
SF3A2-204ENST00000589118 ZNF354CQ86Y25 554 aa15.22■□□□□ 0.03
SF3A2-204ENST00000589118 PLPP6Q8IY26 295 aa15.22■□□□□ 0.03
SF3A2-204ENST00000589118 ZNF564Q8TBZ8 553 aaPredicted RBP15.22■□□□□ 0.03
SF3A2-204ENST00000589118 NKD1Q969G9 470 aa15.22■□□□□ 0.03
SF3A2-204ENST00000589118 C18orf8Q96DM3 657 aa15.22■□□□□ 0.03
SF3A2-204ENST00000589118 FGF22Q9HCT0 170 aa15.22■□□□□ 0.03
SF3A2-204ENST00000589118 OR12D3Q9UGF7 316 aa15.22■□□□□ 0.03
SF3A2-204ENST00000589118 TMEM59LQ9UK28 342 aa15.22■□□□□ 0.03
SF3A2-204ENST00000589118 LRRK2Q5S007 2527 aa15.21■□□□□ 0.03
SF3A2-204ENST00000589118 LIFP15018 202 aa15.21■□□□□ 0.03
SF3A2-204ENST00000589118 POLE2P56282 527 aa15.21■□□□□ 0.03
SF3A2-204ENST00000589118 KCNAB2Q13303 367 aa15.21■□□□□ 0.03
SF3A2-204ENST00000589118 MORC3Q14149 939 aa15.21■□□□□ 0.03
SF3A2-204ENST00000589118 ARHGEF7Q14155 803 aa15.21■□□□□ 0.03
SF3A2-204ENST00000589118 ZSWIM9Q86XI8 627 aa15.21■□□□□ 0.03
SF3A2-204ENST00000589118 IRF2BP1Q8IU81 584 aa15.21■□□□□ 0.03
SF3A2-204ENST00000589118 PELI3Q8N2H9 469 aa15.21■□□□□ 0.03
SF3A2-204ENST00000589118 CPA5Q8WXQ8 436 aa15.21■□□□□ 0.03
SF3A2-204ENST00000589118 ARHGEF26Q96DR7 871 aa15.21■□□□□ 0.03
SF3A2-204ENST00000589118 WDR92Q96MX6 357 aa15.21■□□□□ 0.03
SF3A2-204ENST00000589118 RBM15Q96T37 977 aaKnown RBP eCLIP15.21■□□□□ 0.03
SF3A2-204ENST00000589118 CMKLR1Q99788 373 aa15.21■□□□□ 0.03
SF3A2-204ENST00000589118 NUDT22Q9BRQ3 303 aa15.21■□□□□ 0.03
SF3A2-204ENST00000589118 TTYH3Q9C0H2 523 aa15.21■□□□□ 0.03
SF3A2-204ENST00000589118 PDCL3Q9H2J4 239 aa15.21■□□□□ 0.03
SF3A2-204ENST00000589118 DPEP2Q9H4A9 486 aa15.21■□□□□ 0.03
SF3A2-204ENST00000589118 NOL6Q9H6R4 1146 aaKnown RBP15.21■□□□□ 0.03
SF3A2-204ENST00000589118 SPATS2LQ9NUQ6 558 aaKnown RBP15.21■□□□□ 0.03
SF3A2-204ENST00000589118 PPARGC1AQ9UBK2 798 aaKnown RBP15.21■□□□□ 0.03
SF3A2-204ENST00000589118 SEPT3Q9UH03 358 aa15.21■□□□□ 0.03
SF3A2-204ENST00000589118 MOSPD1Q9UJG1 213 aa15.21■□□□□ 0.03
SF3A2-204ENST00000589118 APPL1Q9UKG1 709 aa15.21■□□□□ 0.03
SF3A2-204ENST00000589118 NEU3Q9UQ49 428 aa15.21■□□□□ 0.03
SF3A2-204ENST00000589118 MAN2B2Q9Y2E5 1009 aa15.21■□□□□ 0.03
SF3A2-204ENST00000589118 A0A1W2PQC6 194 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 BICDL2A1A5D9 508 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 GOLGA6L4A6NEF3 574 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 A8MX80 341 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 KDELR3O43731 214 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 GNA14O95837 355 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 FGF3P11487 239 aaPredicted RBP15.2■□□□□ 0.02
SF3A2-204ENST00000589118 GLB1P16278 677 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 HTR1BP28222 390 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 ALDH4A1P30038 563 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 GABRB2P47870 512 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 LIG3P49916 1009 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 PEX5P50542 639 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 RHOAP61586 193 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 FOXK1P85037 733 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 PAK1Q13153 545 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 HLTFQ14527 1009 aaKnown RBP eCLIP15.2■□□□□ 0.02
SF3A2-204ENST00000589118 CYTH1Q15438 398 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 MAP9Q49MG5 647 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 C14orf28Q4W4Y0 310 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 MANEALQ5VSG8 457 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 NKAIN2Q5VXU1 208 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 BORAQ6PGQ7 559 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 GBP6Q6ZN66 633 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 PYROXD2Q8N2H3 581 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 CCDC185Q8N715 623 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 PATE1Q8WXA2 126 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 RNF31Q96EP0 1072 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 GDAP1L1Q96MZ0 367 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 LGR4Q9BXB1 951 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 C1QTNF7Q9BXJ2 289 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 OSBPL1AQ9BXW6 950 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 PCDH12Q9NPG4 1184 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 METTL5Q9NRN9 209 aaKnown RBP15.2■□□□□ 0.02
SF3A2-204ENST00000589118 PLAAQ9Y263 795 aa15.2■□□□□ 0.02
SF3A2-204ENST00000589118 BLACEA4D250 179 aa15.19■□□□□ 0.02
SF3A2-204ENST00000589118 TMEM110-MUSTN1A8MSY1 372 aa15.19■□□□□ 0.02
SF3A2-204ENST00000589118 NKX2-8O15522 239 aa15.19■□□□□ 0.02
SF3A2-204ENST00000589118 DUX1O43812 170 aa15.19■□□□□ 0.02
SF3A2-204ENST00000589118 BUB1BO60566 1050 aaPredicted RBP15.19■□□□□ 0.02
SF3A2-204ENST00000589118 LRIG2O94898 1065 aa15.19■□□□□ 0.02
SF3A2-204ENST00000589118 RHOQP17081 205 aa15.19■□□□□ 0.02
SF3A2-204ENST00000589118 XPAP23025 273 aaPredicted RBP15.19■□□□□ 0.02
SF3A2-204ENST00000589118 ADRA1BP35368 520 aa15.19■□□□□ 0.02
SF3A2-204ENST00000589118 SNX16P57768 344 aa15.19■□□□□ 0.02
SF3A2-204ENST00000589118 EXOC3L4Q17RC7 722 aa15.19■□□□□ 0.02
SF3A2-204ENST00000589118 C4orf17Q53FE4 359 aa15.19■□□□□ 0.02
SF3A2-204ENST00000589118 EFHC2Q5JST6 749 aa15.19■□□□□ 0.02
SF3A2-204ENST00000589118 SPECC1LQ69YQ0 1117 aa15.19■□□□□ 0.02
SF3A2-204ENST00000589118 ZDHHC17Q8IUH5 632 aa15.19■□□□□ 0.02
SF3A2-204ENST00000589118 TMEM35BQ8NCS4 154 aa15.19■□□□□ 0.02
SF3A2-204ENST00000589118 JOSD2Q8TAC2 188 aa15.19■□□□□ 0.02
SF3A2-204ENST00000589118 HMCESQ96FZ2 354 aa15.19■□□□□ 0.02
SF3A2-204ENST00000589118 MAGEH1Q9H213 219 aa15.19■□□□□ 0.02
SF3A2-204ENST00000589118 CYP4F12Q9HCS2 524 aa15.19■□□□□ 0.02
SF3A2-204ENST00000589118 TMEM248Q9NWD8 314 aa15.19■□□□□ 0.02
SF3A2-204ENST00000589118 LHX3Q9UBR4 397 aa15.19■□□□□ 0.02
SF3A2-204ENST00000589118 HPCAL4Q9UM19 191 aa15.19■□□□□ 0.02
SF3A2-204ENST00000589118 PAXBP1Q9Y5B6 917 aa15.19■□□□□ 0.02
SF3A2-204ENST00000589118 USP9YO00507 2555 aaPredicted RBP15.19■□□□□ 0.02
SF3A2-204ENST00000589118 IGHV5-10-1A0A0J9YXX1 117 aa15.18■□□□□ 0.02
SF3A2-204ENST00000589118 CLEC18AA5D8T8 446 aa15.18■□□□□ 0.02
SF3A2-204ENST00000589118 RAMP2O60895 175 aa15.18■□□□□ 0.02
SF3A2-204ENST00000589118 IGSF6O95976 241 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms