RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 TRABDQ9H4I3 376 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 EPB41L5Q9HCM4 733 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 BCCIPQ9P287 314 aaKnown RBP eCLIP17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 EBF1Q9UH73 591 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 SARDHQ9UL12 918 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 CHKBQ9Y259 395 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 NCKAP1Q9Y2A7 1128 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 PPIL1Q9Y3C6 166 aa17.08■□□□□ 0.32
SCAMP4-211ENST00000588907 MID1O15344 667 aa17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 PPFIA2O75334 1257 aa17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 ZNF217O75362 1048 aa17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 PDGFBP01127 241 aaPredicted RBP17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 CYP2A6P11509 494 aaPredicted RBP17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 GABRG2P18507 467 aa17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 NDUFV2P19404 249 aa17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 MRPS25P82663 173 aaKnown RBP17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 UGP2Q16851 508 aa17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 RASSF3Q86WH2 238 aa17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 PDIK1LQ8N165 341 aa17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 LRRN4CLQ8ND94 238 aa17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 LPCAT1Q8NF37 534 aa17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 HMGB4Q8WW32 186 aa17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 ART4Q93070 314 aa17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 FAM131CQ96AQ9 280 aa17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 LYSMD1Q96S90 227 aa17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 KDM4CQ9H3R0 1056 aa17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 CASS4Q9NQ75 786 aa17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 GDF3Q9NR23 364 aa17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 SPATA6Q9NWH7 488 aaPredicted RBP17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 MTRF1LQ9UGC7 380 aaKnown RBP17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 DMGDHQ9UI17 866 aaKnown RBP17.07■□□□□ 0.32
SCAMP4-211ENST00000588907 CCDC163A0A0D9SF12 145 aa17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 A0A0J9YYE9 177 aa17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 AP1G1O43747 822 aa17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 PRLP01236 227 aa17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 IGLV3-19P01714 112 aa17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 TRBC1P01850 177 aa17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 ATXN1LP0C7T5 689 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 ADRB3P13945 408 aa17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 TNFRSF8P28908 595 aa17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 OXTRP30559 389 aa17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 PDE1BQ01064 536 aa17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 IHHQ14623 411 aa17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 DNAJC21Q5F1R6 531 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 SIRPB2Q5JXA9 342 aa17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 KIAA1324Q6UXG2 1013 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 PARS2Q7L3T8 475 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 TTC7BQ86TV6 843 aa17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 RAVER1Q8IY67 606 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 PGBD3Q8N328 593 aa17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 ZCCHC9Q8N567 271 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 GPR161Q8N6U8 529 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 PIH1D2Q8WWB5 315 aa17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 SCRN2Q96FV2 425 aa17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 NSMCE3Q96MG7 304 aa17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 MCCC1Q96RQ3 725 aaPredicted RBP17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 IL22Q9GZX6 179 aa17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 MAGEE1Q9HCI5 957 aa17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 PRMT8Q9NR22 394 aaPredicted RBP17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 GRHL1Q9NZI5 618 aa17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 BFARQ9NZS9 450 aa17.06■□□□□ 0.32
SCAMP4-211ENST00000588907 CAPN8A6NHC0 703 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 H0Y858 1186 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 EIF3HO15372 352 aaKnown RBP eCLIP17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 LAMTOR5O43504 91 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 RNASEH2AO75792 299 aaKnown RBP17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 TMEM63AO94886 807 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 AGTP01019 485 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 PDHA1P08559 390 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 ZNF30P17039 623 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 NPY2RP49146 381 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 NUBP1P53384 320 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 ARL4CP56559 192 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 GALNT3Q14435 633 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 HIF1AQ16665 826 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 QPCTQ16769 361 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 ANKRD22Q5VYY1 191 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 ANO7Q6IWH7 933 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 HDDC3Q8N4P3 179 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 MDGA1Q8NFP4 955 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 GANCQ8TET4 914 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 PTCD2Q8WV60 388 aaKnown RBP17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 ARRDC3Q96B67 414 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 LRRC39Q96DD0 335 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 SERPINB12Q96P63 405 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 HHIPQ96QV1 700 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 C19orf43Q9BQ61 176 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 FBXL12Q9NXK8 326 aa17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 USP36Q9P275 1121 aaKnown RBP17.05■□□□□ 0.32
SCAMP4-211ENST00000588907 ESYT3A0FGR9 886 aa17.04■□□□□ 0.32
SCAMP4-211ENST00000588907 TSPAN6O43657 245 aa17.04■□□□□ 0.32
SCAMP4-211ENST00000588907 PI15O43692 258 aa17.04■□□□□ 0.32
SCAMP4-211ENST00000588907 USP12O75317 370 aa17.04■□□□□ 0.32
SCAMP4-211ENST00000588907 TIMP2P16035 220 aa17.04■□□□□ 0.32
SCAMP4-211ENST00000588907 DRD3P35462 400 aa17.04■□□□□ 0.32
SCAMP4-211ENST00000588907 P2RY2P41231 377 aa17.04■□□□□ 0.32
SCAMP4-211ENST00000588907 PLTPP55058 493 aa17.04■□□□□ 0.32
SCAMP4-211ENST00000588907 CNTN1Q12860 1018 aa17.04■□□□□ 0.32
SCAMP4-211ENST00000588907 CBLBQ13191 982 aa17.04■□□□□ 0.32
SCAMP4-211ENST00000588907 SPARCL1Q14515 664 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms