RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 ZNF669Q96BR6 464 aaPredicted RBP11.38□□□□□ -0.59
VMP1-207ENST00000588131 ECHDC3Q96DC8 303 aa11.38□□□□□ -0.59
VMP1-207ENST00000588131 ERLEC1Q96DZ1 483 aa11.38□□□□□ -0.59
VMP1-207ENST00000588131 ZNF778Q96MU6 729 aa11.38□□□□□ -0.59
VMP1-207ENST00000588131 FCRL3Q96P31 734 aaPredicted RBP11.38□□□□□ -0.59
VMP1-207ENST00000588131 RANBP9Q96S59 729 aa11.38□□□□□ -0.59
VMP1-207ENST00000588131 KIFC1Q9BW19 673 aa11.38□□□□□ -0.59
VMP1-207ENST00000588131 SUV39H2Q9H5I1 410 aa11.38□□□□□ -0.59
VMP1-207ENST00000588131 VIPAS39Q9H9C1 493 aa11.38□□□□□ -0.59
VMP1-207ENST00000588131 CHRAC1Q9NRG0 131 aa11.38□□□□□ -0.59
VMP1-207ENST00000588131 THEGQ9P2T0 379 aa11.38□□□□□ -0.59
VMP1-207ENST00000588131 IL36AQ9UHA7 158 aa11.38□□□□□ -0.59
VMP1-207ENST00000588131 SOX13Q9UN79 622 aa11.38□□□□□ -0.59
VMP1-207ENST00000588131 DUSP12Q9UNI6 340 aa11.38□□□□□ -0.59
VMP1-207ENST00000588131 TCAF1Q9Y4C2 921 aa11.38□□□□□ -0.59
VMP1-207ENST00000588131 STON1Q9Y6Q2 735 aa11.38□□□□□ -0.59
VMP1-207ENST00000588131 A0A0C4DFX4 3053 aa11.38□□□□□ -0.59
VMP1-207ENST00000588131 A0A087WUV0 522 aaPredicted RBP11.37□□□□□ -0.59
VMP1-207ENST00000588131 FAM237BA0A1B0GVD1 139 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 TCRBV9S1A1TA0A576 114 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 AGPSO00116 658 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 AURKAO14965 403 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 LEFTY1O75610 366 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 EPHX1P07099 455 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 ALPIP09923 528 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 ADRA1DP25100 572 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 GRIA4P48058 902 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 FAM193AP78312 1265 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 RAD51Q06609 339 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 ENPP2Q13822 863 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 CRYMQ14894 314 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 EFTUD2Q15029 972 aaKnown RBP eCLIP11.37□□□□□ -0.59
VMP1-207ENST00000588131 SMAD1Q15797 465 aaKnown RBP11.37□□□□□ -0.59
VMP1-207ENST00000588131 ANKRD20A4Q4UJ75 823 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 SLC44A4Q53GD3 710 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 ALS2CLQ60I27 953 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 TRMT10BQ6PF06 316 aaKnown RBP11.37□□□□□ -0.59
VMP1-207ENST00000588131 TPRG1Q6ZUI0 275 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 TMEM135Q86UB9 458 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 CHPFQ8IZ52 775 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 UNC5BQ8IZJ1 945 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 MDGA1Q8NFP4 955 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 GSDMBQ8TAX9 411 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 BLOC1S5Q8TDH9 187 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 FBF1Q8TES7 1133 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 FAM3CQ92520 227 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 MFSD3Q96ES6 412 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 ZNF641Q96N77 438 aaPredicted RBP11.37□□□□□ -0.59
VMP1-207ENST00000588131 KLHL32Q96NJ5 620 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 NAT9Q9BTE0 207 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 ADGRE3Q9BY15 652 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 PRSS16Q9NQE7 514 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 SMYD2Q9NRG4 433 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 SAMD15Q9P1V8 674 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 PRKAG3Q9UGI9 489 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 SLC2A6Q9UGQ3 507 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 RABGEF1Q9UJ41 708 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 KCTD3Q9Y597 815 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 RPS6KL1Q9Y6S9 549 aa11.37□□□□□ -0.59
VMP1-207ENST00000588131 MYO10Q9HD67 2058 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 A0A0U1RQS6 177 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 ZCWPW2A0A1B0GU75 182 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 TSPAN11A1L157 253 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 MAGEB16A2A368 324 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 HEATR9A2RTY3 570 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 ATP8B1O43520 1251 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 LDB2O43679 373 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 BUD23O43709 281 aaKnown RBP11.36□□□□□ -0.59
VMP1-207ENST00000588131 PIAS1O75925 651 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 USP1O94782 785 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 GSTA2P09210 222 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 GLULP15104 373 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 DRD1P21728 446 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 CD72P21854 359 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 PHBP35232 272 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 ABL2P42684 1182 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 METAP1P53582 386 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 EPHB1P54762 984 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 RPL26P61254 145 aaKnown RBP11.36□□□□□ -0.59
VMP1-207ENST00000588131 ZNF844Q08AG5 666 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 GRSF1Q12849 480 aaKnown RBP eCLIP11.36□□□□□ -0.59
VMP1-207ENST00000588131 PTPRCAPQ14761 206 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 GRM3Q14832 879 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 MLF2Q15773 248 aaPredicted RBP11.36□□□□□ -0.59
VMP1-207ENST00000588131 POM121L1PQ3SYA9 428 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 C2orf27AQ580R0 203 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 SPANXN3Q5MJ09 141 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 TSTD2Q5T7W7 516 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 ESRP1Q6NXG1 681 aaKnown RBP11.36□□□□□ -0.59
VMP1-207ENST00000588131 LRIG3Q6UXM1 1119 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 CCNJLQ8IV13 435 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 PAF1Q8N7H5 531 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 PTCD2Q8WV60 388 aaKnown RBP11.36□□□□□ -0.59
VMP1-207ENST00000588131 OR8D1Q8WZ84 308 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 MSANTD3Q96H12 275 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 FAM129BQ96TA1 746 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 MRM3Q9HC36 420 aaKnown RBP11.36□□□□□ -0.59
VMP1-207ENST00000588131 TREX1Q9NSU2 369 aa11.36□□□□□ -0.59
VMP1-207ENST00000588131 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.36□□□□□ -0.59
VMP1-207ENST00000588131 IL1RAPL1Q9NZN1 696 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms