RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 SLC2A3P11169 496 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 CCNE1P24864 410 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 CDH5P33151 784 aaPredicted RBP5.69□□□□□ -1.5
LINC01538-201ENST00000588074 ATP6V1E1P36543 226 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 STARP49675 285 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 ARHGDIAP52565 204 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 IRX4P78413 519 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 CYP4F8P98187 520 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 RNASELQ05823 741 aaKnown RBP5.69□□□□□ -1.5
LINC01538-201ENST00000588074 ST3GAL1Q11201 340 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 MALLQ13021 153 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 NOGQ13253 232 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 FRG1Q14331 258 aaKnown RBP5.69□□□□□ -1.5
LINC01538-201ENST00000588074 CYP2A13Q16696 494 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 ACSBG2Q5FVE4 666 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 FAM76BQ5HYJ3 339 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 KRBOX4Q5JUW0 171 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 C1orf146Q5VVC0 180 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 TPGS2Q68CL5 300 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 PRR23BQ6ZRT6 265 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 NIPA1Q7RTP0 329 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 DYMQ7RTS9 669 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 TMPRSS9Q7Z410 1059 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 HDDC2Q7Z4H3 204 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 SMYD4Q8IYR2 804 aaPredicted RBP5.69□□□□□ -1.5
LINC01538-201ENST00000588074 DNAAF3Q8N9W5 541 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 KBTBD3Q8NAB2 608 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 NEDD1Q8NHV4 660 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 MARC2Q969Z3 335 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 DMRTA2Q96SC8 542 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 SLC29A1Q99808 456 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 HDAC8Q9BY41 377 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 TMPRSS13Q9BYE2 586 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 EBF3Q9H4W6 596 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 JMJD4Q9H9V9 463 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 EPB41L5Q9HCM4 733 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.69□□□□□ -1.5
LINC01538-201ENST00000588074 GDAP2Q9NXN4 497 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 VPS28Q9UK41 221 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 DENND2AQ9ULE3 1009 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 PCDHGB4Q9UN71 923 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 TMEM131LA2VDJ0 1609 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 EIF2AK4Q9P2K8 1649 aaKnown RBP5.69□□□□□ -1.5
LINC01538-201ENST00000588074 SYNGAP1Q96PV0 1343 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 A0A0A6YYJ9 748 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 HEATR9A2RTY3 570 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 GRID2IPA4D2P6 1211 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 ZNF839A8K0R7 811 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 SLCO1B7G3V0H7 640 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 PODXLO00592 558 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 PIP5K1BO14986 540 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 POLR2DO15514 142 aaKnown RBP5.69□□□□□ -1.5
LINC01538-201ENST00000588074 DENRO43583 198 aaKnown RBP5.69□□□□□ -1.5
LINC01538-201ENST00000588074 TOM1L1O75674 476 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 NDUFA10O95299 355 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 ADAMTS2O95450 1211 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 STARD3NLO95772 234 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 GUCA1CO95843 209 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 CKBP12277 381 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 BMP4P12644 408 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 MTHFD2P13995 350 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 ANPEPP15144 967 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 TMEM11P17152 192 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 PSMA2P25787 234 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 PRDX6P30041 224 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 RFC4P35249 363 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 IL12RB1P42701 662 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 PDE1AP54750 535 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 TPTEP56180 551 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 CDK16Q00536 496 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 GALK2Q01415 458 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 SELPLGQ14242 412 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 FGL2Q14314 439 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 SLC39A14Q15043 492 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 RRS1Q15050 365 aaKnown RBP5.69□□□□□ -1.5
LINC01538-201ENST00000588074 UAP1Q16222 522 aaPredicted RBP5.69□□□□□ -1.5
LINC01538-201ENST00000588074 UGP2Q16851 508 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 EARS2Q5JPH6 523 aaKnown RBP5.69□□□□□ -1.5
LINC01538-201ENST00000588074 SLC30A6Q6NXT4 461 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 RPUSD3Q6P087 351 aaKnown RBP5.69□□□□□ -1.5
LINC01538-201ENST00000588074 CNKSR3Q6P9H4 555 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 ZNF540Q8NDQ6 660 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 POMGNT1Q8WZA1 660 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 ST8SIA4Q92187 359 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 LPPQ93052 612 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 RAB7BQ96AH8 199 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 HEXIM2Q96MH2 286 aaKnown RBP5.69□□□□□ -1.5
LINC01538-201ENST00000588074 BBS4Q96RK4 519 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 KRT12Q99456 494 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 MMP19Q99542 508 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 PRMT1Q99873 361 aaKnown RBP5.69□□□□□ -1.5
LINC01538-201ENST00000588074 LLPHQ9BRT6 129 aaKnown RBP5.69□□□□□ -1.5
LINC01538-201ENST00000588074 TEX13BQ9BXU2 312 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 LSG1Q9H089 658 aaKnown RBP5.69□□□□□ -1.5
LINC01538-201ENST00000588074 FGFR1OP2Q9NVK5 253 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 CYB5R1Q9UHQ9 305 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 SPATA2Q9UM82 520 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 PCDHA6Q9UN73 950 aa5.69□□□□□ -1.5
LINC01538-201ENST00000588074 SMG5Q9UPR3 1016 aaKnown RBP5.69□□□□□ -1.5
LINC01538-201ENST00000588074 CAB39Q9Y376 341 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms