RNA–Protein interactions for RNA: ENST00000587760.5

NFIX-209, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-209ENST00000587760 SLC25A13Q9UJS0 675 aa17.04■□□□□ 0.32
NFIX-209ENST00000587760 PHTF1Q9UMS5 762 aa17.04■□□□□ 0.32
NFIX-209ENST00000587760 CCL26Q9Y258 94 aa17.04■□□□□ 0.32
NFIX-209ENST00000587760 HS3ST2Q9Y278 367 aa17.04■□□□□ 0.32
NFIX-209ENST00000587760 MTO1Q9Y2Z2 717 aaKnown RBP17.04■□□□□ 0.32
NFIX-209ENST00000587760 GLP2RO95838 553 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 AHSGP02765 367 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 TROVE2P10155 538 aaKnown RBP eCLIP17.03■□□□□ 0.32
NFIX-209ENST00000587760 STMN1P16949 149 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 SLC1A2P43004 574 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 SNRPD1P62314 119 aaKnown RBP17.03■□□□□ 0.32
NFIX-209ENST00000587760 USP10Q14694 798 aaKnown RBP17.03■□□□□ 0.32
NFIX-209ENST00000587760 GRM3Q14832 879 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 ZKSCAN8Q15776 578 aaPredicted RBP17.03■□□□□ 0.32
NFIX-209ENST00000587760 PITRM1Q5JRX3 1037 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 ARMC12Q5T9G4 340 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 FAM109BQ6ICB4 259 aaPredicted RBP17.03■□□□□ 0.32
NFIX-209ENST00000587760 GLT6D1Q7Z4J2 308 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 SPRED2Q7Z698 418 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 NUDCD3Q8IVD9 361 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 ARID3BQ8IVW6 561 aaPredicted RBP17.03■□□□□ 0.32
NFIX-209ENST00000587760 OTUD6BQ8N6M0 293 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 CCDC63Q8NA47 563 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 ARMC2Q8NEN0 867 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 ZNF398Q8TD17 642 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 BHMTQ93088 406 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 HDAC10Q969S8 669 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 TUBGCP5Q96RT8 1024 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 NLE1Q9NVX2 485 aaPredicted RBP17.03■□□□□ 0.32
NFIX-209ENST00000587760 SIRPGQ9P1W8 387 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 KLHL14Q9P2G3 628 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 SLC39A10Q9ULF5 831 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 VPS9D1Q9Y2B5 631 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 YBX2Q9Y2T7 364 aaKnown RBP17.03■□□□□ 0.32
NFIX-209ENST00000587760 ARL2BPQ9Y2Y0 163 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 ACTL7AQ9Y615 435 aa17.03■□□□□ 0.32
NFIX-209ENST00000587760 FAM95CA0A1B0GW59 222 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 A0A1W2PQ67 120 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 GOLGA8TH3BQL2 631 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 PLIN3O60664 434 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 BPGMP07738 259 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 LPOP22079 712 aaPredicted RBP17.02■□□□□ 0.32
NFIX-209ENST00000587760 CD70P32970 193 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 EPHB1P54762 984 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 BCL2L1Q07817 233 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 CTBP1Q13363 440 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 TSNAXIP1Q2TAA8 658 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 ZNF697Q5TEC3 545 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 PPP2R2DQ66LE6 453 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 FOXR1Q6PIV2 292 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 AFTPHQ6ULP2 937 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 RAPH1Q70E73 1250 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 RBM23Q86U06 439 aaKnown RBP17.02■□□□□ 0.32
NFIX-209ENST00000587760 CILP2Q8IUL8 1156 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 DENND6AQ8IWF6 608 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 LPCAT1Q8NF37 534 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 RDH11Q8TC12 318 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 LMLNQ96KR4 655 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 ATP13A3Q9H7F0 1226 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 PLK2Q9NYY3 685 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.02■□□□□ 0.32
NFIX-209ENST00000587760 GGT7Q9UJ14 662 aa17.02■□□□□ 0.32
NFIX-209ENST00000587760 FCF1Q9Y324 198 aaKnown RBP17.02■□□□□ 0.32
NFIX-209ENST00000587760 A0A087X1B8 175 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 WDR91A4D1P6 747 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 NEDD8-MDP1E9PL57 170 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 NRG2O14511 850 aaPredicted RBP17.01■□□□□ 0.31
NFIX-209ENST00000587760 FZD6O60353 706 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 GJB3O75712 270 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 TGDSO95455 350 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 PRAMEF12O95522 483 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 GSRP00390 522 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 PRLP01236 227 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 C2P06681 752 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 PABPC1P11940 636 aaKnown RBP17.01■□□□□ 0.31
NFIX-209ENST00000587760 CEBPBP17676 345 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 SERPINA4P29622 427 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 CSRP3P50461 194 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 RAB10P61026 200 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 NTHL1P78549 312 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 RAD51Q06609 339 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 SMAD1Q15797 465 aaKnown RBP17.01■□□□□ 0.31
NFIX-209ENST00000587760 N4BP2L1Q5TBK1 243 aaPredicted RBP17.01■□□□□ 0.31
NFIX-209ENST00000587760 FAM47EQ6ZV65 393 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 TMEM25Q86YD3 366 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 PCDH20Q8N6Y1 951 aaKnown RBP17.01■□□□□ 0.31
NFIX-209ENST00000587760 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.01■□□□□ 0.31
NFIX-209ENST00000587760 OR2AP1Q8NGE2 309 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 E2F7Q96AV8 911 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 ATXN7L3BQ96GX2 97 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 TCF12Q99081 682 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 TSSK1BQ9BXA7 367 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 MAGEE1Q9HCI5 957 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 ACOT9Q9Y305 439 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 PCDHGC4Q9Y5F7 938 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 GBF1Q92538 1859 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 MYLKQ15746 1914 aa17.01■□□□□ 0.31
NFIX-209ENST00000587760 H2AFYO75367 372 aaKnown RBP17■□□□□ 0.31
NFIX-209ENST00000587760 PGLSO95336 258 aa17■□□□□ 0.31
NFIX-209ENST00000587760 TYRP14679 529 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms