RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 HEMGNQ9BXL5 484 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 PCED1AQ9H1Q7 454 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 RSPH9Q9H1X1 276 aaPredicted RBP7.96□□□□□ -1.14
VMP1-204ENST00000587259 DPH5Q9H2P9 285 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 PRORYQ9H606 182 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 SGK2Q9HBY8 427 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 SLCO3A1Q9UIG8 710 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 SHOC2Q9UQ13 582 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 ZNF148Q9UQR1 794 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 ZNF462Q96JM2 2506 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 MGAQ8IWI9 3026 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 PTPRQQ9UMZ3 2332 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 KNTC1P50748 2209 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 TCRBV7S2A1N4TA0A589 114 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 ZSCAN5CA6NGD5 496 aaPredicted RBP7.95□□□□□ -1.14
VMP1-204ENST00000587259 C3orf70A6NLC5 250 aaPredicted RBP7.95□□□□□ -1.14
VMP1-204ENST00000587259 BRINP1O60477 761 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 PPFIA2O75334 1257 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 GRAP2O75791 330 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 SASH3O75995 380 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 LTFP02788 710 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 PLA2G2AP14555 144 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 IL1R2P27930 398 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 ECHS1P30084 290 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 SLC8A1P32418 973 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 ADCY8P40145 1251 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 RPL21P46778 160 aaKnown RBP7.95□□□□□ -1.14
VMP1-204ENST00000587259 PLTPP55058 493 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 HDAC4P56524 1084 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 PITX1P78337 314 aaPredicted RBP7.95□□□□□ -1.14
VMP1-204ENST00000587259 ATP11AP98196 1134 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 GABPB1Q06547 395 aaPredicted RBP7.95□□□□□ -1.14
VMP1-204ENST00000587259 C19orf57Q0VDD7 668 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 XRCC4Q13426 336 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 DPYSL3Q14195 570 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 MORF4L2Q15014 288 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 OASLQ15646 514 aaKnown RBP7.95□□□□□ -1.14
VMP1-204ENST00000587259 DCAF6Q58WW2 860 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 C6orf118Q5T5N4 469 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 SCYL2Q6P3W7 929 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 FBXL19Q6PCT2 694 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 PPP1R21Q6ZMI0 780 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 KDM7AQ6ZMT4 941 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 TRMT10CQ7L0Y3 403 aaKnown RBP7.95□□□□□ -1.14
VMP1-204ENST00000587259 TMC3Q7Z5M5 1100 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 TMPRSS12Q86WS5 348 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 CPNE8Q86YQ8 564 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 CDKL3Q8IVW4 592 aaPredicted RBP7.95□□□□□ -1.14
VMP1-204ENST00000587259 GSPT2Q8IYD1 628 aaKnown RBP7.95□□□□□ -1.14
VMP1-204ENST00000587259 ZNF843Q8N446 348 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 OR14C36Q8NHC7 312 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 SLC35B2Q8TB61 432 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 C1orf54Q8WWF1 131 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 KLK6Q92876 244 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 ART4Q93070 314 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 FAF2Q96CS3 445 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 NXPE2Q96DL1 559 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 SERAC1Q96JX3 654 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 RNF157Q96PX1 679 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 NPY6RQ99463 290 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 OMDQ99983 421 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 TRIM51Q9BSJ1 452 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 SNRNP25Q9BV90 132 aaKnown RBP7.95□□□□□ -1.14
VMP1-204ENST00000587259 FRMD8Q9BZ67 464 aaPredicted RBP7.95□□□□□ -1.14
VMP1-204ENST00000587259 STMN4Q9H169 189 aaPredicted RBP7.95□□□□□ -1.14
VMP1-204ENST00000587259 ZDHHC18Q9NUE0 388 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 KLHL11Q9NVR0 708 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 DONSONQ9NYP3 566 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 PCSK1NQ9UHG2 260 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 STOML2Q9UJZ1 356 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 AP4E1Q9UPM8 1137 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 ERVW-1Q9UQF0 538 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 NCKAP1Q9Y2A7 1128 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 HBS1LQ9Y450 684 aaKnown RBP7.95□□□□□ -1.14
VMP1-204ENST00000587259 PCDHB1Q9Y5F3 818 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 MYLKQ15746 1914 aa7.95□□□□□ -1.14
VMP1-204ENST00000587259 TBC1D3DA0A087WVF3 549 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 TBC1D3IA0A087WXS9 549 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 TBC1D3EA0A087X179 549 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 TBC1D3KA0A087X1G2 549 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 TBC1D3FA6NER0 549 aaPredicted RBP7.94□□□□□ -1.14
VMP1-204ENST00000587259 HACD1B0YJ81 288 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 TBC1D3LB9A6J9 549 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 RNF103O00237 685 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 TRIM38O00635 465 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 CASC3O15234 703 aaKnown RBP7.94□□□□□ -1.14
VMP1-204ENST00000587259 ATXN7O15265 892 aaPredicted RBP7.94□□□□□ -1.14
VMP1-204ENST00000587259 ACSL4O60488 711 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 STK10O94804 968 aaKnown RBP7.94□□□□□ -1.14
VMP1-204ENST00000587259 IGLV3-27P01718 113 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 KRT14P02533 472 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 FYNP06241 537 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 ATP5BP06576 529 aaKnown RBP7.94□□□□□ -1.14
VMP1-204ENST00000587259 IVLP07476 585 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 TBC1D3HP0C7X1 549 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 TCF4P15884 667 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 CD38P28907 300 aa7.94□□□□□ -1.14
VMP1-204ENST00000587259 EPHA8P29322 1005 aaPredicted RBP7.94□□□□□ -1.14
VMP1-204ENST00000587259 OAS2P29728 719 aaKnown RBP7.94□□□□□ -1.14
VMP1-204ENST00000587259 SERPINB6P35237 376 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms