RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 ETV5P41161 510 aa16.47■□□□□ 0.23
NPC1-205ENST00000587163 PTPN9P43378 593 aa16.47■□□□□ 0.23
NPC1-205ENST00000587163 CSRP3P50461 194 aa16.47■□□□□ 0.23
NPC1-205ENST00000587163 ZFP36L1Q07352 338 aaKnown RBP16.47■□□□□ 0.23
NPC1-205ENST00000587163 INO80DQ53TQ3 878 aaPredicted RBP16.47■□□□□ 0.23
NPC1-205ENST00000587163 STRADAQ7RTN6 431 aa16.47■□□□□ 0.23
NPC1-205ENST00000587163 GKN2Q86XP6 184 aa16.47■□□□□ 0.23
NPC1-205ENST00000587163 GPR156Q8NFN8 814 aa16.47■□□□□ 0.23
NPC1-205ENST00000587163 FAM172AQ8WUF8 416 aa16.47■□□□□ 0.23
NPC1-205ENST00000587163 HMCESQ96FZ2 354 aa16.47■□□□□ 0.23
NPC1-205ENST00000587163 TMEM74Q96NL1 305 aa16.47■□□□□ 0.23
NPC1-205ENST00000587163 C11orf70Q9BRQ4 267 aa16.47■□□□□ 0.23
NPC1-205ENST00000587163 FAM117AQ9C073 453 aa16.47■□□□□ 0.23
NPC1-205ENST00000587163 PCDH12Q9NPG4 1184 aa16.47■□□□□ 0.23
NPC1-205ENST00000587163 STARD5Q9NSY2 213 aa16.47■□□□□ 0.23
NPC1-205ENST00000587163 KLQ9UEF7 1012 aa16.47■□□□□ 0.23
NPC1-205ENST00000587163 IL17BQ9UHF5 180 aa16.47■□□□□ 0.23
NPC1-205ENST00000587163 LOXL2Q9Y4K0 774 aa16.47■□□□□ 0.23
NPC1-205ENST00000587163 PRAMEF33A0A0G2JMD5 474 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 PRAMEF10O60809 474 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 PRKCGP05129 697 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 JMJD7P0C870 316 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 LIPCP11150 499 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 XPAP23025 273 aaPredicted RBP16.46■□□□□ 0.23
NPC1-205ENST00000587163 HTR1BP28222 390 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 LIG3P49916 1009 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 FMO1Q01740 532 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 ELP6Q0PNE2 266 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 UGP2Q16851 508 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 OGFOD3Q6PK18 319 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 TMPRSS9Q7Z410 1059 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 VASH2Q86V25 355 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 ZFAND4Q86XD8 727 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 CCNJLQ8IV13 435 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 FAM114A1Q8IWE2 563 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 RTL3Q8N8U3 475 aaKnown RBP16.46■□□□□ 0.23
NPC1-205ENST00000587163 PLA2G15Q8NCC3 412 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 CASKIN2Q8WXE0 1202 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 PDXPQ96GD0 296 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 RBM15Q96T37 977 aaKnown RBP eCLIP16.46■□□□□ 0.23
NPC1-205ENST00000587163 SUV39H2Q9H5I1 410 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 APPL1Q9UKG1 709 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 DAAM1Q9Y4D1 1078 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 HEMK1Q9Y5R4 338 aaPredicted RBP16.46■□□□□ 0.23
NPC1-205ENST00000587163 UNC13CQ8NB66 2214 aa16.46■□□□□ 0.23
NPC1-205ENST00000587163 TSPAN11A1L157 253 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 RASA4BC9J798 803 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 PES1O00541 588 aaKnown RBP16.45■□□□□ 0.22
NPC1-205ENST00000587163 RASA4O43374 803 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 BUB1BO60566 1050 aaPredicted RBP16.45■□□□□ 0.22
NPC1-205ENST00000587163 GFPT2O94808 682 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 TNFP01375 233 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 ITGB2P05107 769 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 PCCBP05166 539 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 FAM87AP0C7U9 286 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 WT1P19544 449 aaPredicted RBP16.45■□□□□ 0.22
NPC1-205ENST00000587163 EPHB2P29323 1055 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 RFC1P35251 1148 aaPredicted RBP16.45■□□□□ 0.22
NPC1-205ENST00000587163 SUOXP51687 545 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 CDR2Q01850 454 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 PTP4A2Q12974 167 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 SERINC3Q13530 473 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 AGERQ15109 404 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 CERCAMQ5T4B2 595 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 ZSWIM9Q86XI8 627 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 OR6C4Q8NGE1 309 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 HCAR2Q8TDS4 363 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 OR1E3Q8WZA6 343 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 NTAN1Q96AB6 310 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 FUBP1Q96AE4 644 aaKnown RBP16.45■□□□□ 0.22
NPC1-205ENST00000587163 WDR92Q96MX6 357 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 ARHGAP9Q9BRR9 750 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 MRPL40Q9NQ50 206 aaKnown RBP16.45■□□□□ 0.22
NPC1-205ENST00000587163 FOXJ2Q9P0K8 574 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 DGKBQ9Y6T7 804 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 RNF215Q9Y6U7 377 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 UBR5O95071 2799 aaPredicted RBP16.45■□□□□ 0.22
NPC1-205ENST00000587163 ANKRD36A6QL64 1941 aa16.45■□□□□ 0.22
NPC1-205ENST00000587163 SPTA1P02549 2419 aa16.44■□□□□ 0.22
NPC1-205ENST00000587163 TMEM202A6NGA9 273 aa16.44■□□□□ 0.22
NPC1-205ENST00000587163 TERTO14746 1132 aaKnown RBP16.44■□□□□ 0.22
NPC1-205ENST00000587163 GLB1P16278 677 aa16.44■□□□□ 0.22
NPC1-205ENST00000587163 YBEYP58557 167 aaPredicted RBP16.44■□□□□ 0.22
NPC1-205ENST00000587163 CYP4F2P78329 520 aa16.44■□□□□ 0.22
NPC1-205ENST00000587163 BECN1Q14457 450 aa16.44■□□□□ 0.22
NPC1-205ENST00000587163 WDR59Q6PJI9 974 aa16.44■□□□□ 0.22
NPC1-205ENST00000587163 XKR5Q6UX68 686 aa16.44■□□□□ 0.22
NPC1-205ENST00000587163 SLFN11Q7Z7L1 901 aa16.44■□□□□ 0.22
NPC1-205ENST00000587163 ZNF677Q86XU0 584 aa16.44■□□□□ 0.22
NPC1-205ENST00000587163 CAMK1DQ8IU85 385 aa16.44■□□□□ 0.22
NPC1-205ENST00000587163 FAM46DQ8NEK8 389 aa16.44■□□□□ 0.22
NPC1-205ENST00000587163 USP7Q93009 1102 aa16.44■□□□□ 0.22
NPC1-205ENST00000587163 PCDHB18PQ96TA0 734 aa16.44■□□□□ 0.22
NPC1-205ENST00000587163 NCAPGQ9BPX3 1015 aa16.44■□□□□ 0.22
NPC1-205ENST00000587163 GANQ9H2C0 597 aa16.44■□□□□ 0.22
NPC1-205ENST00000587163 PCDHGA4Q9Y5G9 962 aa16.44■□□□□ 0.22
NPC1-205ENST00000587163 C9orf172C9J069 976 aa16.43■□□□□ 0.22
NPC1-205ENST00000587163 J3KR12 359 aa16.43■□□□□ 0.22
NPC1-205ENST00000587163 SUV39H1O43463 412 aa16.43■□□□□ 0.22
NPC1-205ENST00000587163 KRT3P12035 628 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms