RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 NAXDQ8IW45 347 aa13.4□□□□□ -0.26
SMARCA4-210ENST00000586892 CCDC13Q8IYE1 715 aa13.4□□□□□ -0.26
SMARCA4-210ENST00000586892 RCOR2Q8IZ40 523 aa13.4□□□□□ -0.26
SMARCA4-210ENST00000586892 DEFB124Q8NES8 71 aa13.4□□□□□ -0.26
SMARCA4-210ENST00000586892 EXD1Q8NHP7 514 aa13.4□□□□□ -0.26
SMARCA4-210ENST00000586892 KIAA1524Q8TCG1 905 aa13.4□□□□□ -0.26
SMARCA4-210ENST00000586892 NSMCE3Q96MG7 304 aa13.4□□□□□ -0.26
SMARCA4-210ENST00000586892 OLFM3Q96PB7 478 aa13.4□□□□□ -0.26
SMARCA4-210ENST00000586892 BRD8Q9H0E9 1235 aa13.4□□□□□ -0.26
SMARCA4-210ENST00000586892 RBM22Q9NW64 420 aaKnown RBP eCLIP13.4□□□□□ -0.26
SMARCA4-210ENST00000586892 CA5BQ9Y2D0 317 aa13.4□□□□□ -0.26
SMARCA4-210ENST00000586892 TTC24A2A3L6 582 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 CCDC66A2RUB6 948 aa13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 CFAP69A5D8W1 941 aa13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 KCNK3O14649 394 aa13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 FPGTO14772 594 aa13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 FLRT2O43155 660 aa13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 SH3BP5O60239 455 aa13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 MMP20O60882 483 aa13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 ITIH2P19823 946 aa13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 CLDN2P57739 230 aa13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 DYNLT1P63172 113 aa13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 ITKQ08881 620 aa13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 KYAT3Q6YP21 454 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 SPATS2Q86XZ4 545 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 DCP2Q8IU60 420 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 CCDC50Q8IVM0 306 aa13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 LRRC57Q8N9N7 239 aa13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 CCDC112Q8NEF3 446 aa13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 OR13H1Q8NG92 308 aa13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 LGMNQ99538 433 aa13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 KLF6Q99612 283 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 SEMA3CQ99985 751 aa13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 DESI2Q9BSY9 194 aa13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 WRAP53Q9BUR4 548 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 PCDHGC4Q9Y5F7 938 aa13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 PCDHA3Q9Y5H8 950 aa13.39□□□□□ -0.27
SMARCA4-210ENST00000586892 hCG_1818297A0A087WSY0 165 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 GRID2IPA4D2P6 1211 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 POM121BA6NF01 834 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 GIPC1O14908 333 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 RAD51BO15315 384 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 ARHGAP6O43182 974 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 CST8O60676 142 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 CPP00450 1065 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 KRT10P13645 584 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 C6P13671 934 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 TGM2P21980 687 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 CTNNA2P26232 953 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 GRK6P43250 576 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 RABIFP47224 123 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 RXRGP48443 463 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 MARCKSL1P49006 195 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 LIG3P49916 1009 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 COPS2P61201 443 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 FAM193AP78312 1265 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 IFI35P80217 286 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 AP1B1Q10567 949 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 TRAF2Q12933 501 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 AGERQ15109 404 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 PPP2R5EQ16537 467 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 INAVAQ3KP66 663 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 ARMC12Q5T9G4 340 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 KAZNQ674X7 775 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 NPNTQ6UXI9 565 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 Q6ZSR6 202 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 DPPA4Q7L190 304 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 PTAR1Q7Z6K3 402 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 SYCE1Q8N0S2 351 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 SETD7Q8WTS6 366 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 PDCD6IPQ8WUM4 868 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 KRT35Q92764 455 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 CENPTQ96BT3 561 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 BMFQ96LC9 184 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 GPR27Q9NS67 375 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 PCOLCE2Q9UKZ9 415 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 PHTF1Q9UMS5 762 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 TTLL3Q9Y4R7 772 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 PCDHB9Q9Y5E1 797 aa13.38□□□□□ -0.27
SMARCA4-210ENST00000586892 MED19A0JLT2 244 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-210ENST00000586892 MACROD2A1Z1Q3 448 aa13.37□□□□□ -0.27
SMARCA4-210ENST00000586892 KCNK1O00180 336 aa13.37□□□□□ -0.27
SMARCA4-210ENST00000586892 TOR1BO14657 336 aa13.37□□□□□ -0.27
SMARCA4-210ENST00000586892 PGLSO95336 258 aa13.37□□□□□ -0.27
SMARCA4-210ENST00000586892 JCHAINP01591 159 aa13.37□□□□□ -0.27
SMARCA4-210ENST00000586892 PRKCGP05129 697 aa13.37□□□□□ -0.27
SMARCA4-210ENST00000586892 HLA-DQB2P05538 268 aa13.37□□□□□ -0.27
SMARCA4-210ENST00000586892 ADRB1P08588 477 aa13.37□□□□□ -0.27
SMARCA4-210ENST00000586892 ELFN1P0C7U0 828 aa13.37□□□□□ -0.27
SMARCA4-210ENST00000586892 CA4P22748 312 aa13.37□□□□□ -0.27
SMARCA4-210ENST00000586892 EPHA8P29322 1005 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-210ENST00000586892 IL9RQ01113 521 aa13.37□□□□□ -0.27
SMARCA4-210ENST00000586892 PRAMEF14Q5SWL7 426 aa13.37□□□□□ -0.27
SMARCA4-210ENST00000586892 SLC22A18ASQ8N1D0 253 aa13.37□□□□□ -0.27
SMARCA4-210ENST00000586892 RNF10Q8N5U6 811 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-210ENST00000586892 SAP25Q8TEE9 199 aa13.37□□□□□ -0.27
SMARCA4-210ENST00000586892 LRRN4Q8WUT4 740 aa13.37□□□□□ -0.27
SMARCA4-210ENST00000586892 P3H4Q92791 437 aa13.37□□□□□ -0.27
SMARCA4-210ENST00000586892 IFT43Q96FT9 208 aa13.37□□□□□ -0.27
SMARCA4-210ENST00000586892 CAMK1GQ96NX5 476 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms