RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 TRMT61BQ9BVS5 477 aaKnown RBP20.59■□□□□ 0.89
ATG4D-204ENST00000586417 KCNK12Q9HB15 430 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 MKS1Q9NXB0 559 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 GTSE1Q9NYZ3 720 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 LHX3Q9UBR4 397 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 GRID1Q9ULK0 1009 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 NDUFAB1O14561 156 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 TM9SF1O15321 606 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 PENKP01210 267 aaPredicted RBP20.59■□□□□ 0.89
ATG4D-204ENST00000586417 FGF1P05230 155 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 ASGR2P07307 311 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 ITGA2BP08514 1039 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 TYRP14679 529 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 SCNN1BP51168 640 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 LMAN2Q12907 356 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 CNGA3Q16281 694 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 KIAA0930Q6ICG6 404 aaPredicted RBP20.59■□□□□ 0.89
ATG4D-204ENST00000586417 STRA8Q7Z7C7 330 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 RNF135Q8IUD6 432 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 CNTN4Q8IWV2 1026 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 ZNF473Q8WTR7 871 aaKnown RBP20.59■□□□□ 0.89
ATG4D-204ENST00000586417 IFT43Q96FT9 208 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 LMLNQ96KR4 655 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 RBBP8Q99708 897 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 C12orf65Q9H3J6 166 aaKnown RBP20.59■□□□□ 0.89
ATG4D-204ENST00000586417 IARS2Q9NSE4 1012 aaKnown RBP20.59■□□□□ 0.89
ATG4D-204ENST00000586417 SLC17A7Q9P2U7 560 aa20.59■□□□□ 0.89
ATG4D-204ENST00000586417 COL4A3Q01955 1670 aa20.58■□□□□ 0.89
ATG4D-204ENST00000586417 GOLGA8TH3BQL2 631 aa20.58■□□□□ 0.89
ATG4D-204ENST00000586417 ALDOAP04075 364 aaKnown RBP20.58■□□□□ 0.89
ATG4D-204ENST00000586417 CES1P23141 567 aa20.58■□□□□ 0.89
ATG4D-204ENST00000586417 ZSCAN26Q16670 478 aa20.58■□□□□ 0.89
ATG4D-204ENST00000586417 CDHR3Q6ZTQ4 885 aa20.58■□□□□ 0.89
ATG4D-204ENST00000586417 TAX1BP1Q86VP1 789 aa20.58■□□□□ 0.89
ATG4D-204ENST00000586417 LRRC34Q8IZ02 419 aa20.58■□□□□ 0.89
ATG4D-204ENST00000586417 NAT16Q8N8M0 369 aa20.58■□□□□ 0.89
ATG4D-204ENST00000586417 MAGEB18Q96M61 343 aa20.58■□□□□ 0.89
ATG4D-204ENST00000586417 ECT2Q9H8V3 914 aa20.58■□□□□ 0.89
ATG4D-204ENST00000586417 SCUBE2Q9NQ36 999 aa20.58■□□□□ 0.89
ATG4D-204ENST00000586417 TXNDC16Q9P2K2 825 aa20.58■□□□□ 0.89
ATG4D-204ENST00000586417 MROH6A6NGR9 719 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 ARNTLO00327 626 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 VAPBO95292 243 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 PAPSS2O95340 614 aaPredicted RBP20.57■□□□□ 0.88
ATG4D-204ENST00000586417 NDST3O95803 873 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 MT-CO1P00395 513 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 CYBBP04839 570 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 F7P08709 466 aaPredicted RBP20.57■□□□□ 0.88
ATG4D-204ENST00000586417 FOXN2P32314 431 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 CD70P32970 193 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 LIMK2P53671 638 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 IL9RQ01113 521 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 GALNT3Q14435 633 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 PDGFRLQ15198 375 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 QPCTQ16769 361 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 PUS10Q3MIT2 529 aaKnown RBP20.57■□□□□ 0.88
ATG4D-204ENST00000586417 TSTD2Q5T7W7 516 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 FOXR1Q6PIV2 292 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 LVRNQ6Q4G3 990 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 CNPY4Q8N129 248 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 PLCD3Q8N3E9 789 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 C2orf49Q9BVC5 232 aaPredicted RBP20.57■□□□□ 0.88
ATG4D-204ENST00000586417 TDRD1Q9BXT4 1180 aaKnown RBP20.57■□□□□ 0.88
ATG4D-204ENST00000586417 FAM107BQ9H098 131 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 MARK1Q9P0L2 795 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 KIAA1522Q9P206 1035 aaPredicted RBP20.57■□□□□ 0.88
ATG4D-204ENST00000586417 INTS6Q9UL03 887 aaKnown RBP20.57■□□□□ 0.88
ATG4D-204ENST00000586417 TICRRQ7Z2Z1 1910 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 TRIM24O15164 1050 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 SIN3BO75182 1162 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 PRLP01236 227 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 ADH5P11766 374 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 ETV4P43268 484 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 CSE1LP55060 971 aaKnown RBP20.57■□□□□ 0.88
ATG4D-204ENST00000586417 NSUN2Q08J23 767 aaKnown RBP eCLIP20.57■□□□□ 0.88
ATG4D-204ENST00000586417 GAB4Q2WGN9 574 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 ASTLQ6HA08 431 aaPredicted RBP20.57■□□□□ 0.88
ATG4D-204ENST00000586417 SLC44A3Q8N4M1 653 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 OR13J1Q8NGT2 312 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 ISL2Q96A47 359 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 ACDQ96AP0 544 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 SRPK1Q96SB4 655 aaKnown RBP20.57■□□□□ 0.88
ATG4D-204ENST00000586417 THEGQ9P2T0 379 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 FAM50BQ9Y247 325 aa20.57■□□□□ 0.88
ATG4D-204ENST00000586417 FCF1Q9Y324 198 aaKnown RBP20.57■□□□□ 0.88
ATG4D-204ENST00000586417 COPEO14579 308 aa20.56■□□□□ 0.88
ATG4D-204ENST00000586417 LDB2O43679 373 aa20.56■□□□□ 0.88
ATG4D-204ENST00000586417 NFATC1O95644 943 aa20.56■□□□□ 0.88
ATG4D-204ENST00000586417 DHRS4L1P0CG22 281 aa20.56■□□□□ 0.88
ATG4D-204ENST00000586417 PAMP19021 973 aa20.56■□□□□ 0.88
ATG4D-204ENST00000586417 SPRP35270 261 aaPredicted RBP20.56■□□□□ 0.88
ATG4D-204ENST00000586417 PLK1P53350 603 aa20.56■□□□□ 0.88
ATG4D-204ENST00000586417 RUNX3Q13761 415 aa20.56■□□□□ 0.88
ATG4D-204ENST00000586417 PLEKHG6Q3KR16 790 aa20.56■□□□□ 0.88
ATG4D-204ENST00000586417 MICALCLQ6ZW33 695 aa20.56■□□□□ 0.88
ATG4D-204ENST00000586417 C12orf40Q86WS4 652 aa20.56■□□□□ 0.88
ATG4D-204ENST00000586417 ACMSDQ8TDX5 336 aa20.56■□□□□ 0.88
ATG4D-204ENST00000586417 PAIP2Q9BPZ3 127 aaKnown RBP20.56■□□□□ 0.88
ATG4D-204ENST00000586417 BRD9Q9H8M2 597 aa20.56■□□□□ 0.88
ATG4D-204ENST00000586417 PCMTD2Q9NV79 361 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms