RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 GOT2P00505 430 aaKnown RBP12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 PYGLP06737 847 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 RBP1P09455 135 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 DLDP09622 509 aaKnown RBP12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 LTA4HP09960 611 aaKnown RBP12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 NDST2P52849 883 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 ZNF789Q5FWF6 425 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 LRRC73Q5JTD7 316 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 CACUL1Q86Y37 369 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 NAT16Q8N8M0 369 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 PGAP3Q96FM1 320 aaPredicted RBP12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 ADGRE3Q9BY15 652 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 MID1IP1Q9NPA3 183 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 SEMA4BQ9NPR2 832 aaPredicted RBP12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 ARHGAP26Q9UNA1 814 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 RAI2Q9Y5P3 530 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 WDR81Q562E7 1941 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 CENPFP49454 3210 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 CCDC162PA2VCL2 907 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 C9JVG2 144 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 CHEK2O96017 543 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 PRSS56P0CW18 603 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 CSF2RAP15509 400 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 APLP1P51693 650 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 YBEYP58557 167 aaPredicted RBP12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 PARP15Q460N3 678 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 LIPMQ5VYY2 423 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 PLPP4Q5VZY2 271 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 DDX53Q86TM3 631 aaKnown RBP12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 RBM23Q86U06 439 aaKnown RBP12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 TMEM135Q86UB9 458 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 OR4L1Q8NH43 312 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 INPP5DQ92835 1189 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 SERPINI1Q99574 410 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 LRMDAQ9H2I8 198 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 VPS45Q9NRW7 570 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 TMEM51Q9NW97 253 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 LCTP09848 1927 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 SDK1Q7Z5N4 2213 aa12.52□□□□□ -0.41
SMARCA4-208ENST00000585799 CCL16O15467 120 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 COCHO43405 550 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 VPS26AO75436 327 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 CST5P28325 142 aaPredicted RBP12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 ARSDP51689 593 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 AP2B1P63010 937 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 DSC1Q08554 894 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 PDZD8Q8NEN9 1154 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 RAB3IL1Q8TBN0 382 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 GRIN3AQ8TCU5 1115 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 PYDC1Q8WXC3 89 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 CDK5RAP1Q96SZ6 601 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 CLIC5Q9NZA1 410 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 F8W8V4 182 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 KATNA1O75449 491 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 RAD51Q06609 339 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 IL10RBQ08334 325 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 TBL3Q12788 808 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 CLEC6AQ6EIG7 209 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 ISLR2Q6UXK2 745 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 NAPRTQ6XQN6 538 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 TREML1Q86YW5 311 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 PCDH20Q8N6Y1 951 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 PXYLP1Q8TE99 480 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 TRPC4APQ8TEL6 797 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 MZB1Q8WU39 189 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 ULK4Q96C45 1275 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 CASD1Q96PB1 797 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 OSBPL1AQ9BXW6 950 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 C20orf27Q9GZN8 174 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 BRCA1P38398 1863 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 HMX2A2RU54 273 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 SIN3BO75182 1162 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 CLDN11O75508 207 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 FGF3P11487 239 aaPredicted RBP12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 ATP5F1P24539 256 aaPredicted RBP12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 GKP32189 559 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 SLC9B1Q4ZJI4 515 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 RETSATQ6NUM9 610 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 CDH19Q9H159 772 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 ARHGEF3Q9NR81 526 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 SIRPGQ9P1W8 387 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 BTRCQ9Y297 605 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 ANKRD6Q9Y2G4 727 aa12.51□□□□□ -0.41
SMARCA4-208ENST00000585799 A0A1W2PRU2 124 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 TNFRSF10BO14763 440 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 HDAC3O15379 428 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 LMNAP02545 664 aaKnown RBP12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 FGF1P05230 155 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 MAGEA6P43360 314 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 CLCN5P51795 746 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 SEMA3BQ13214 749 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 GALNTL6Q49A17 601 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 RALGPS1Q5JS13 557 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 FAM151BQ6UXP7 276 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 CEP97Q8IW35 865 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 IGSF21Q96ID5 467 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 TSGA13Q96PP4 275 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 OR52B2Q96RD2 323 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 TAS2R13Q9NYV9 303 aa12.5□□□□□ -0.41
SMARCA4-208ENST00000585799 KIF3CO14782 793 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms