RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 ABI3BPQ7Z7G0 1075 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 TRIM58Q8NG06 486 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 SLC6A18Q96N87 628 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 PPP1R2P1Q96PQ5 205 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 SRPK1Q96SB4 655 aaKnown RBP13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 SLC17A9Q9BYT1 436 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 OSBPL8Q9BZF1 889 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 SMOC1Q9H4F8 434 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 SLC32A1Q9H598 525 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 NT5MQ9NPB1 228 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 PACSIN2Q9UNF0 486 aaPredicted RBP13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 PPIL1Q9Y3C6 166 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 PLXNA2O75051 1894 aa13.92□□□□□ -0.18
PRKCSH-202ENST00000585540 FPGTO14772 594 aa13.91□□□□□ -0.18
PRKCSH-202ENST00000585540 MUSKO15146 869 aa13.91□□□□□ -0.18
PRKCSH-202ENST00000585540 GJB3O75712 270 aa13.91□□□□□ -0.18
PRKCSH-202ENST00000585540 ARRB1P49407 418 aaPredicted RBP13.91□□□□□ -0.18
PRKCSH-202ENST00000585540 YPEL5P62699 121 aa13.91□□□□□ -0.18
PRKCSH-202ENST00000585540 ITKQ08881 620 aa13.91□□□□□ -0.18
PRKCSH-202ENST00000585540 AP1B1Q10567 949 aa13.91□□□□□ -0.18
PRKCSH-202ENST00000585540 PRKD1Q15139 912 aaPredicted RBP13.91□□□□□ -0.18
PRKCSH-202ENST00000585540 CCDC181Q5TID7 509 aa13.91□□□□□ -0.18
PRKCSH-202ENST00000585540 DPPA4Q7L190 304 aa13.91□□□□□ -0.18
PRKCSH-202ENST00000585540 CAMK1DQ8IU85 385 aa13.91□□□□□ -0.18
PRKCSH-202ENST00000585540 PGBD5Q8N414 524 aa13.91□□□□□ -0.18
PRKCSH-202ENST00000585540 RMDN1Q96DB5 314 aa13.91□□□□□ -0.18
PRKCSH-202ENST00000585540 KLHDC7BQ96G42 594 aa13.91□□□□□ -0.18
PRKCSH-202ENST00000585540 HES6Q96HZ4 224 aa13.91□□□□□ -0.18
PRKCSH-202ENST00000585540 SEMA3CQ99985 751 aa13.91□□□□□ -0.18
PRKCSH-202ENST00000585540 GTPBP2Q9BX10 602 aaKnown RBP13.91□□□□□ -0.18
PRKCSH-202ENST00000585540 TDRD1Q9BXT4 1180 aaKnown RBP13.91□□□□□ -0.18
PRKCSH-202ENST00000585540 FRMD8P1Q9BZ68 369 aaPredicted RBP13.91□□□□□ -0.18
PRKCSH-202ENST00000585540 EBF2Q9HAK2 575 aa13.91□□□□□ -0.18
PRKCSH-202ENST00000585540 PYCARDQ9ULZ3 195 aa13.91□□□□□ -0.18
PRKCSH-202ENST00000585540 ZFR2Q9UPR6 939 aaKnown RBP13.91□□□□□ -0.18
PRKCSH-202ENST00000585540 A0A1B0GVT2 93 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 C4orf47A7E2U8 309 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 TLR4O00206 839 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 RNF103O00237 685 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 TM4SF5O14894 197 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 FLRT2O43155 660 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 PCDHGA12O60330 932 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 FZD6O60353 706 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 GDF9O60383 454 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 PGLSO95336 258 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 ZNF30P17039 623 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 MAT2AP31153 395 aaKnown RBP13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 RXRGP48443 463 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 NXPH1P58417 271 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 FOXK2Q01167 660 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 NOMO1Q15155 1222 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 LLGL1Q15334 1064 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 TEX44Q53QW1 395 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 SEL1L2Q5TEA6 688 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 KAZNQ674X7 775 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 CDKL3Q8IVW4 592 aaPredicted RBP13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 REXO1L1PQ8IX06 675 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 ATL2Q8NHH9 583 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 SCRN2Q96FV2 425 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 QKIQ96PU8 341 aaKnown RBP eCLIP13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 LGMNQ99538 433 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 ELF4Q99607 663 aaPredicted RBP13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 GAREM1Q9H706 876 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 NOD2Q9HC29 1040 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 PCDH12Q9NPG4 1184 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 GPR27Q9NS67 375 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 TRHDEQ9UKU6 1024 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 ZNF292O60281 2723 aa13.9□□□□□ -0.18
PRKCSH-202ENST00000585540 USP27XA6NNY8 438 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 DDX3YO15523 660 aaKnown RBP13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 SPINT1O43278 529 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 ZSCAN12O43309 604 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 STK10O94804 968 aaKnown RBP13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 MAP3K6O95382 1288 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 HLA-DQB2P05538 268 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 PYGLP06737 847 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 ELFN1P0C7U0 828 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 MSNP26038 577 aaKnown RBP13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 VIPR1P32241 457 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 CSNK1EP49674 416 aaKnown RBP13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 MAXP61244 160 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 DYNLT1P63172 113 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 PTK2BQ14289 1009 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 KIF19Q2TAC6 998 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 HLA-BQ31612 363 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 SEL1L3Q68CR1 1132 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 ARRDC2Q8TBH0 407 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 ALG3Q92685 438 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 LRRC45Q96CN5 670 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 TBATAQ96M53 351 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 MCCC1Q96RQ3 725 aaPredicted RBP13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 LYSMD1Q96S90 227 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 ADGRE3Q9BY15 652 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 SLC25A51Q9H1U9 297 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 CARD9Q9H257 536 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 TM7SF3Q9NS93 570 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 TRMT1Q9NXH9 659 aaKnown RBP13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 RAI2Q9Y5P3 530 aa13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.89□□□□□ -0.19
PRKCSH-202ENST00000585540 CEP250Q9BV73 2442 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms