RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 PRKAA2P54646 552 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 TUBB3Q13509 450 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 TRIM68Q6AZZ1 485 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 Q6ZNB5 142 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 TMEM135Q86UB9 458 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ATPAF2Q8N5M1 289 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 PPP2R3CQ969Q6 453 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 CDCA3Q99618 268 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ZNF184Q99676 751 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 SFXN1Q9H9B4 322 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 COPG2Q9UBF2 871 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 TRHDEQ9UKU6 1024 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 TMEM114B3SHH9 223 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ZNF197O14709 1029 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 USP1O94782 785 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 APOA4P06727 396 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 MGAT1P26572 445 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 OR1E1P30953 314 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 NPY2RP49146 381 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 SERPINB8P50452 374 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 PAPOLAP51003 745 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 NDST2P52849 883 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ZNF33AQ06730 810 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 PCLAFQ15004 111 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ING5Q8WYH8 240 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 JADE3Q92613 823 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 NSMCE4AQ9NXX6 385 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 BFARQ9NZS9 450 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ARHGAP26Q9UNA1 814 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 CCL26Q9Y258 94 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 DNAJC16Q9Y2G8 782 aa15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 MRPS23Q9Y3D9 190 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-236ENST00000584991 PRR5-ARHGAP8B1AHC4 643 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 PSMD3O43242 534 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 AP2A1O95782 977 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 CEBPBP17676 345 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 CCNCP24863 283 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 PTPN3P26045 913 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 CPOXP36551 454 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 MAPKAPK2P49137 400 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ALDH18A1P54886 795 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 CDH4P55283 916 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ABCE1P61221 599 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 IRX4P78413 519 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ARHGAP8P85298 464 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 FSCBQ5H9T9 825 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 HTR3DQ70Z44 454 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ZNF567Q8N184 647 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ITFG1Q8TB96 612 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 SH3RF2Q8TEC5 729 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 NRG4Q8WWG1 115 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 HMCESQ96FZ2 354 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ZSWIM3Q96MP5 696 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 TSGA13Q96PP4 275 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 RBBP8Q99708 897 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 APOL5Q9BWW9 433 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 VCX3BQ9H321 246 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 PRO3102Q9H379 93 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ZNF576Q9H609 170 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 NSUN3Q9H649 340 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 SCOCQ9UIL1 159 aa15.11■□□□□ 0.01
CDK5RAP3-236ENST00000584991 MAGEA13PA6NCF6 341 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ARHGAP42A6NI28 874 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 TIMM44O43615 452 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 CCNT2O60583 730 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 MAFKO60675 156 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 RAMP2O60895 175 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 KITP10721 976 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 RALBP11234 206 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ANPEPP15144 967 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 PAX7P23759 505 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 CSE1LP55060 971 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 XIAPP98170 497 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 KDSRQ06136 332 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 HYAL1Q12794 435 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 CBX2Q14781 532 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 TCEAL5Q5H9L2 206 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 RARS2Q5T160 578 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ITPRIPL1Q6GPH6 555 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 POTEHQ6S545 545 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 BBS7Q8IWZ6 715 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 KIRREL3Q8IZU9 778 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 RDH11Q8TC12 318 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 USP13Q92995 863 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 FAM167BQ9BTA0 163 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 THTPAQ9BU02 230 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 DZANK1Q9NVP4 752 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 SLC7A8Q9UHI5 535 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ZNF510Q9Y2H8 683 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 RPS6KL1Q9Y6S9 549 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 CHD5Q8TDI0 1954 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 SOBPA7XYQ1 873 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 F5H423 210 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 SLC22A2O15244 555 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 LINC01565O15544 149 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 CLDN11O75508 207 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 PAPLNO95428 1278 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 GLP2RO95838 553 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 CPA3P15088 417 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms