RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 MUC3AQ02505 3323 aa18.44■□□□□ 0.54
RFFL-211ENST00000584541 ESYT3A0FGR9 886 aa18.43■□□□□ 0.54
RFFL-211ENST00000584541 UPK3BL1B0FP48 263 aa18.43■□□□□ 0.54
RFFL-211ENST00000584541 ANKRD66B4E2M5 251 aa18.43■□□□□ 0.54
RFFL-211ENST00000584541 UPK3BL2E5RIL1 263 aa18.43■□□□□ 0.54
RFFL-211ENST00000584541 USP12O75317 370 aa18.43■□□□□ 0.54
RFFL-211ENST00000584541 PDHA1P08559 390 aa18.43■□□□□ 0.54
RFFL-211ENST00000584541 CDH17Q12864 832 aa18.43■□□□□ 0.54
RFFL-211ENST00000584541 SIRPB2Q5JXA9 342 aa18.43■□□□□ 0.54
RFFL-211ENST00000584541 ANKRD22Q5VYY1 191 aa18.43■□□□□ 0.54
RFFL-211ENST00000584541 ANO7Q6IWH7 933 aa18.43■□□□□ 0.54
RFFL-211ENST00000584541 USP45Q70EL2 814 aa18.43■□□□□ 0.54
RFFL-211ENST00000584541 ERN2Q76MJ5 926 aaKnown RBP18.43■□□□□ 0.54
RFFL-211ENST00000584541 PARS2Q7L3T8 475 aaKnown RBP18.43■□□□□ 0.54
RFFL-211ENST00000584541 KBTBD6Q86V97 674 aa18.43■□□□□ 0.54
RFFL-211ENST00000584541 HDDC3Q8N4P3 179 aa18.43■□□□□ 0.54
RFFL-211ENST00000584541 FBXL6Q8N531 539 aa18.43■□□□□ 0.54
RFFL-211ENST00000584541 SEC14L1Q92503 715 aa18.43■□□□□ 0.54
RFFL-211ENST00000584541 ARRDC3Q96B67 414 aa18.43■□□□□ 0.54
RFFL-211ENST00000584541 SRPK1Q96SB4 655 aaKnown RBP18.43■□□□□ 0.54
RFFL-211ENST00000584541 HDAC8Q9BY41 377 aa18.43■□□□□ 0.54
RFFL-211ENST00000584541 FAM129AQ9BZQ8 928 aa18.43■□□□□ 0.54
RFFL-211ENST00000584541 SLC6A17Q9H1V8 727 aa18.43■□□□□ 0.54
RFFL-211ENST00000584541 ARNT2Q9HBZ2 717 aa18.43■□□□□ 0.54
RFFL-211ENST00000584541 XAB2Q9HCS7 855 aaKnown RBP18.43■□□□□ 0.54
RFFL-211ENST00000584541 TCRBV7S3A2A0A539 114 aa18.42■□□□□ 0.54
RFFL-211ENST00000584541 GOLGA8MH3BSY2 632 aa18.42■□□□□ 0.54
RFFL-211ENST00000584541 RNASEH2AO75792 299 aaKnown RBP18.42■□□□□ 0.54
RFFL-211ENST00000584541 TMEM63AO94886 807 aa18.42■□□□□ 0.54
RFFL-211ENST00000584541 PRLP01236 227 aa18.42■□□□□ 0.54
RFFL-211ENST00000584541 C7P10643 843 aa18.42■□□□□ 0.54
RFFL-211ENST00000584541 CUL1Q13616 776 aa18.42■□□□□ 0.54
RFFL-211ENST00000584541 UGP2Q16851 508 aa18.42■□□□□ 0.54
RFFL-211ENST00000584541 ERAP2Q6P179 960 aa18.42■□□□□ 0.54
RFFL-211ENST00000584541 LRRC8BQ6P9F7 803 aa18.42■□□□□ 0.54
RFFL-211ENST00000584541 USP30Q70CQ3 517 aa18.42■□□□□ 0.54
RFFL-211ENST00000584541 OR52K1Q8NGK4 314 aa18.42■□□□□ 0.54
RFFL-211ENST00000584541 PIH1D2Q8WWB5 315 aa18.42■□□□□ 0.54
RFFL-211ENST00000584541 IFT81Q8WYA0 676 aa18.42■□□□□ 0.54
RFFL-211ENST00000584541 RUBCNQ92622 972 aa18.42■□□□□ 0.54
RFFL-211ENST00000584541 RAB7BQ96AH8 199 aa18.42■□□□□ 0.54
RFFL-211ENST00000584541 EPHX3Q9H6B9 360 aa18.42■□□□□ 0.54
RFFL-211ENST00000584541 C2orf42Q9NWW7 574 aa18.42■□□□□ 0.54
RFFL-211ENST00000584541 FBXL12Q9NXK8 326 aa18.42■□□□□ 0.54
RFFL-211ENST00000584541 GRHL1Q9NZI5 618 aa18.42■□□□□ 0.54
RFFL-211ENST00000584541 A0A1W2PP55 124 aa18.41■□□□□ 0.54
RFFL-211ENST00000584541 BHMG1C9JSJ3 638 aaPredicted RBP18.41■□□□□ 0.54
RFFL-211ENST00000584541 LAMTOR5O43504 91 aa18.41■□□□□ 0.54
RFFL-211ENST00000584541 PAPSS2O95340 614 aaPredicted RBP18.41■□□□□ 0.54
RFFL-211ENST00000584541 ATXN1LP0C7T5 689 aaKnown RBP18.41■□□□□ 0.54
RFFL-211ENST00000584541 CYP2A6P11509 494 aaPredicted RBP18.41■□□□□ 0.54
RFFL-211ENST00000584541 MLNP12872 115 aa18.41■□□□□ 0.54
RFFL-211ENST00000584541 ADRB3P13945 408 aa18.41■□□□□ 0.54
RFFL-211ENST00000584541 TIMP2P16035 220 aa18.41■□□□□ 0.54
RFFL-211ENST00000584541 CHRNA4P43681 627 aa18.41■□□□□ 0.54
RFFL-211ENST00000584541 METAP1P53582 386 aa18.41■□□□□ 0.54
RFFL-211ENST00000584541 PLTPP55058 493 aa18.41■□□□□ 0.54
RFFL-211ENST00000584541 ELP6Q0PNE2 266 aa18.41■□□□□ 0.54
RFFL-211ENST00000584541 CNTN1Q12860 1018 aa18.41■□□□□ 0.54
RFFL-211ENST00000584541 OLIG2Q13516 323 aa18.41■□□□□ 0.54
RFFL-211ENST00000584541 HLTFQ14527 1009 aaKnown RBP eCLIP18.41■□□□□ 0.54
RFFL-211ENST00000584541 QPCTQ16769 361 aa18.41■□□□□ 0.54
RFFL-211ENST00000584541 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.41■□□□□ 0.54
RFFL-211ENST00000584541 ZSWIM9Q86XI8 627 aa18.41■□□□□ 0.54
RFFL-211ENST00000584541 AADATQ8N5Z0 425 aa18.41■□□□□ 0.54
RFFL-211ENST00000584541 ART4Q93070 314 aa18.41■□□□□ 0.54
RFFL-211ENST00000584541 CASS4Q9NQ75 786 aa18.41■□□□□ 0.54
RFFL-211ENST00000584541 GDF3Q9NR23 364 aa18.41■□□□□ 0.54
RFFL-211ENST00000584541 FZD4Q9ULV1 537 aa18.41■□□□□ 0.54
RFFL-211ENST00000584541 PPIL1Q9Y3C6 166 aa18.41■□□□□ 0.54
RFFL-211ENST00000584541 A0A0J9YYE9 177 aa18.4■□□□□ 0.54
RFFL-211ENST00000584541 SLC7A4O43246 635 aa18.4■□□□□ 0.54
RFFL-211ENST00000584541 TRBC1P01850 177 aa18.4■□□□□ 0.54
RFFL-211ENST00000584541 CTPS1P17812 591 aa18.4■□□□□ 0.54
RFFL-211ENST00000584541 DRD3P35462 400 aa18.4■□□□□ 0.54
RFFL-211ENST00000584541 P2RY2P41231 377 aa18.4■□□□□ 0.54
RFFL-211ENST00000584541 NPY2RP49146 381 aa18.4■□□□□ 0.54
RFFL-211ENST00000584541 ARL4CP56559 192 aa18.4■□□□□ 0.54
RFFL-211ENST00000584541 FAM193AP78312 1265 aa18.4■□□□□ 0.54
RFFL-211ENST00000584541 ERCC6LQ2NKX8 1250 aa18.4■□□□□ 0.54
RFFL-211ENST00000584541 RASSF3Q86WH2 238 aa18.4■□□□□ 0.54
RFFL-211ENST00000584541 PDIK1LQ8N165 341 aa18.4■□□□□ 0.54
RFFL-211ENST00000584541 TMEM105Q8N8V8 129 aa18.4■□□□□ 0.54
RFFL-211ENST00000584541 MDGA1Q8NFP4 955 aa18.4■□□□□ 0.54
RFFL-211ENST00000584541 SCRN2Q96FV2 425 aa18.4■□□□□ 0.54
RFFL-211ENST00000584541 SERPINB12Q96P63 405 aa18.4■□□□□ 0.54
RFFL-211ENST00000584541 FOXP3Q9BZS1 431 aa18.4■□□□□ 0.54
RFFL-211ENST00000584541 BFARQ9NZS9 450 aa18.4■□□□□ 0.54
RFFL-211ENST00000584541 HACD3Q9P035 362 aa18.4■□□□□ 0.54
RFFL-211ENST00000584541 MTRF1LQ9UGC7 380 aaKnown RBP18.4■□□□□ 0.54
RFFL-211ENST00000584541 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.4■□□□□ 0.54
RFFL-211ENST00000584541 V9GYY5 206 aaPredicted RBP18.4■□□□□ 0.54
RFFL-211ENST00000584541 MYLKQ15746 1914 aa18.4■□□□□ 0.54
RFFL-211ENST00000584541 CAPN8A6NHC0 703 aa18.39■□□□□ 0.53
RFFL-211ENST00000584541 PLK4O00444 970 aa18.39■□□□□ 0.53
RFFL-211ENST00000584541 NEMP1O14524 444 aa18.39■□□□□ 0.53
RFFL-211ENST00000584541 PPFIA2O75334 1257 aa18.39■□□□□ 0.53
RFFL-211ENST00000584541 ZNF217O75362 1048 aa18.39■□□□□ 0.53
RFFL-211ENST00000584541 MCM3P25205 808 aa18.39■□□□□ 0.53
RFFL-211ENST00000584541 GRIA1P42261 906 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms