RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 CATSPERBQ9H7T0 1116 aa11.29□□□□□ -0.6
CCDC47-206ENST00000584112 NDFIP2Q9NV92 336 aa11.29□□□□□ -0.6
CCDC47-206ENST00000584112 TMEM63CQ9P1W3 806 aa11.29□□□□□ -0.6
CCDC47-206ENST00000584112 HECAQ9UBI9 543 aaPredicted RBP11.29□□□□□ -0.6
CCDC47-206ENST00000584112 NEU3Q9UQ49 428 aa11.29□□□□□ -0.6
CCDC47-206ENST00000584112 PCDHGA4Q9Y5G9 962 aa11.29□□□□□ -0.6
CCDC47-206ENST00000584112 COL27A1Q8IZC6 1860 aaPredicted RBP11.29□□□□□ -0.6
CCDC47-206ENST00000584112 LRP4O75096 1905 aa11.29□□□□□ -0.6
CCDC47-206ENST00000584112 FN1P02751 2386 aaKnown RBP11.28□□□□□ -0.6
CCDC47-206ENST00000584112 TCRBV5S1A1TA0A578 114 aa11.28□□□□□ -0.6
CCDC47-206ENST00000584112 KDELR3O43731 214 aa11.28□□□□□ -0.6
CCDC47-206ENST00000584112 AP1G1O43747 822 aa11.28□□□□□ -0.6
CCDC47-206ENST00000584112 THEGLP0DJG4 465 aa11.28□□□□□ -0.6
CCDC47-206ENST00000584112 PRLRP16471 622 aa11.28□□□□□ -0.6
CCDC47-206ENST00000584112 EPHB2P29323 1055 aa11.28□□□□□ -0.6
CCDC47-206ENST00000584112 HTR7P34969 479 aa11.28□□□□□ -0.6
CCDC47-206ENST00000584112 YBEYP58557 167 aaPredicted RBP11.28□□□□□ -0.6
CCDC47-206ENST00000584112 RAD51Q06609 339 aa11.28□□□□□ -0.6
CCDC47-206ENST00000584112 TMEM259Q4ZIN3 620 aa11.28□□□□□ -0.6
CCDC47-206ENST00000584112 SFMBT2Q5VUG0 894 aa11.28□□□□□ -0.6
CCDC47-206ENST00000584112 IRF2BP2Q7Z5L9 587 aa11.28□□□□□ -0.6
CCDC47-206ENST00000584112 VASH2Q86V25 355 aa11.28□□□□□ -0.6
CCDC47-206ENST00000584112 DCP2Q8IU60 420 aaKnown RBP11.28□□□□□ -0.6
CCDC47-206ENST00000584112 RYBPQ8N488 228 aaPredicted RBP11.28□□□□□ -0.6
CCDC47-206ENST00000584112 RTL3Q8N8U3 475 aaKnown RBP11.28□□□□□ -0.6
CCDC47-206ENST00000584112 OR2AP1Q8NGE2 309 aa11.28□□□□□ -0.6
CCDC47-206ENST00000584112 KLK6Q92876 244 aa11.28□□□□□ -0.6
CCDC47-206ENST00000584112 ARHGEF26Q96DR7 871 aa11.28□□□□□ -0.6
CCDC47-206ENST00000584112 ATXN7L3BQ96GX2 97 aa11.28□□□□□ -0.6
CCDC47-206ENST00000584112 FEM1CQ96JP0 617 aa11.28□□□□□ -0.6
CCDC47-206ENST00000584112 MYOCQ99972 504 aa11.28□□□□□ -0.6
CCDC47-206ENST00000584112 OSBPL1AQ9BXW6 950 aa11.28□□□□□ -0.6
CCDC47-206ENST00000584112 TM6SF2Q9BZW4 377 aa11.28□□□□□ -0.6
CCDC47-206ENST00000584112 PARVAQ9NVD7 372 aa11.28□□□□□ -0.6
CCDC47-206ENST00000584112 A6NNZ2 444 aa11.27□□□□□ -0.61
CCDC47-206ENST00000584112 EIF3CLB5ME19 914 aaKnown RBP11.27□□□□□ -0.61
CCDC47-206ENST00000584112 FGF10O15520 208 aaPredicted RBP11.27□□□□□ -0.61
CCDC47-206ENST00000584112 TEX33O43247 280 aa11.27□□□□□ -0.61
CCDC47-206ENST00000584112 TSPAN6O43657 245 aa11.27□□□□□ -0.61
CCDC47-206ENST00000584112 BUB1O43683 1085 aa11.27□□□□□ -0.61
CCDC47-206ENST00000584112 CREB3O43889 395 aa11.27□□□□□ -0.61
CCDC47-206ENST00000584112 POP4O95707 220 aaKnown RBP11.27□□□□□ -0.61
CCDC47-206ENST00000584112 CD160O95971 181 aa11.27□□□□□ -0.61
CCDC47-206ENST00000584112 IGSF6O95976 241 aa11.27□□□□□ -0.61
CCDC47-206ENST00000584112 RPL7AP62424 266 aaKnown RBP11.27□□□□□ -0.61
CCDC47-206ENST00000584112 PARP15Q460N3 678 aa11.27□□□□□ -0.61
CCDC47-206ENST00000584112 HS1BP3Q53T59 392 aa11.27□□□□□ -0.61
CCDC47-206ENST00000584112 ZNF805Q5CZA5 627 aa11.27□□□□□ -0.61
CCDC47-206ENST00000584112 PPP1R15BQ5SWA1 713 aa11.27□□□□□ -0.61
CCDC47-206ENST00000584112 PARS2Q7L3T8 475 aaKnown RBP11.27□□□□□ -0.61
CCDC47-206ENST00000584112 IFT43Q96FT9 208 aa11.27□□□□□ -0.61
CCDC47-206ENST00000584112 GDAP1L1Q96MZ0 367 aa11.27□□□□□ -0.61
CCDC47-206ENST00000584112 EIF3CQ99613 913 aaKnown RBP11.27□□□□□ -0.61
CCDC47-206ENST00000584112 CALN1Q9BXU9 219 aa11.27□□□□□ -0.61
CCDC47-206ENST00000584112 SLC17A9Q9BYT1 436 aa11.27□□□□□ -0.61
CCDC47-206ENST00000584112 UNKQ9C0B0 810 aaKnown RBP11.27□□□□□ -0.61
CCDC47-206ENST00000584112 ADNPQ9H2P0 1102 aa11.27□□□□□ -0.61
CCDC47-206ENST00000584112 KLHL11Q9NVR0 708 aa11.27□□□□□ -0.61
CCDC47-206ENST00000584112 FZD10Q9ULW2 581 aa11.27□□□□□ -0.61
CCDC47-206ENST00000584112 ZFR2Q9UPR6 939 aaKnown RBP11.27□□□□□ -0.61
CCDC47-206ENST00000584112 CA5BQ9Y2D0 317 aa11.27□□□□□ -0.61
CCDC47-206ENST00000584112 FADS3Q9Y5Q0 445 aa11.27□□□□□ -0.61
CCDC47-206ENST00000584112 HS3ST3A1Q9Y663 406 aa11.27□□□□□ -0.61
CCDC47-206ENST00000584112 RTTNQ86VV8 2226 aa11.27□□□□□ -0.61
CCDC47-206ENST00000584112 A0A1W2PQC6 194 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 LRRC53A6NM62 1247 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 C16orf96A6NNT2 1141 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 WASH4PA8MWX3 477 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 RNF103O00237 685 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 KRIT1O00522 736 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 NEMP1O14524 444 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 TMCC1O94876 653 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 TNFSF15O95150 251 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 ZNF165P49910 485 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 POLE2P56282 527 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 TPI1P60174 286 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 RHOAP61586 193 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 SGCGQ13326 291 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 ASIC2Q16515 512 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 MYLK3Q32MK0 819 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 INO80DQ53TQ3 878 aaPredicted RBP11.26□□□□□ -0.61
CCDC47-206ENST00000584112 SEL1L3Q68CR1 1132 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 CAVIN1Q6NZI2 390 aaKnown RBP11.26□□□□□ -0.61
CCDC47-206ENST00000584112 KYAT3Q6YP21 454 aaKnown RBP11.26□□□□□ -0.61
CCDC47-206ENST00000584112 GCNT7Q6ZNI0 430 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 TMC6Q7Z403 805 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 PTAR1Q7Z6K3 402 aaPredicted RBP11.26□□□□□ -0.61
CCDC47-206ENST00000584112 ABI3BPQ7Z7G0 1075 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 CLEC14AQ86T13 490 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 UMODL1-AS1Q8N2C9 162 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 PYROXD2Q8N2H3 581 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 OR13H1Q8NG92 308 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 PDCD6IPQ8WUM4 868 aaKnown RBP11.26□□□□□ -0.61
CCDC47-206ENST00000584112 MARVELD3Q96A59 401 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 SYT11Q9BT88 431 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 MAGEB5Q9BZ81 275 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 FZD3Q9NPG1 666 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 CUEDC1Q9NWM3 386 aaPredicted RBP11.26□□□□□ -0.61
CCDC47-206ENST00000584112 ACTL7AQ9Y615 435 aa11.26□□□□□ -0.61
CCDC47-206ENST00000584112 ATRQ13535 2644 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms