RNA–Protein interactions for RNA: ENST00000583796.1

IFT20-213, Transcript of intraflagellar transport 20, humanhuman

Gene IFT20, Length 1,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-213ENST00000583796 SLC26A3P40879 764 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 CCR2P41597 374 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 SLC1A2P43004 574 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 GRIA4P48058 902 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 PRKAA2P54646 552 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 GPM6BQ13491 265 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 IHHQ14623 411 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 GRM3Q14832 879 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 TEAD2Q15562 447 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 ZNF77Q15935 545 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 TSNAXIP1Q2TAA8 658 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 FSCBQ5H9T9 825 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 SPDYAQ5MJ70 313 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 FOXR1Q6PIV2 292 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 CILP2Q8IUL8 1156 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 ARMC2Q8NEN0 867 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 TCF12Q99081 682 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 DZANK1Q9NVP4 752 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 SLC17A6Q9P2U8 582 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 TLK1Q9UKI8 766 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 HS3ST2Q9Y278 367 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 RAI2Q9Y5P3 530 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 HCFC2Q9Y5Z7 792 aa10.28□□□□□ -0.76
IFT20-213ENST00000583796 A0A087X1B8 175 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 ANKRD66B4E2M5 251 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 PFDN6O15212 129 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 FZD6O60353 706 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 SNAP91O60641 907 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 RFPL2O75678 378 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 SNUPNO95149 360 aaKnown RBP10.27□□□□□ -0.77
IFT20-213ENST00000583796 GLP2RO95838 553 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 IGSF6O95976 241 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 AHSGP02765 367 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 ATP5BP06576 529 aaKnown RBP10.27□□□□□ -0.77
IFT20-213ENST00000583796 NEFHP12036 1026 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 EPCAMP16422 314 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 STMN1P16949 149 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 ALDH3A1P30838 453 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 RGRP47804 291 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 ZNF140P52738 457 aaPredicted RBP10.27□□□□□ -0.77
IFT20-213ENST00000583796 RAB10P61026 200 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 PPARDQ03181 441 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 CCDC15Q0P6D6 951 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 LMAN2Q12907 356 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 RNF187Q5TA31 235 aaPredicted RBP10.27□□□□□ -0.77
IFT20-213ENST00000583796 N4BP2L1Q5TBK1 243 aaPredicted RBP10.27□□□□□ -0.77
IFT20-213ENST00000583796 AFTPHQ6ULP2 937 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 KDELC2Q7Z4H8 507 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 SRLQ86TD4 932 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 NUDCD3Q8IVD9 361 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 PLPP6Q8IY26 295 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.27□□□□□ -0.77
IFT20-213ENST00000583796 BLOC1S5Q8TDH9 187 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 PPP2R3CQ969Q6 453 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 E2F7Q96AV8 911 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 RMDN1Q96DB5 314 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 LMLNQ96KR4 655 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 TUBGCP5Q96RT8 1024 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 TSSK1BQ9BXA7 367 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 TRIM55Q9BYV6 548 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 KDM4CQ9H3R0 1056 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 FAM96AQ9H5X1 160 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 SFXN1Q9H9B4 322 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 POPDC3Q9HBV1 291 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 INTS10Q9NVR2 710 aaKnown RBP10.27□□□□□ -0.77
IFT20-213ENST00000583796 NLE1Q9NVX2 485 aaPredicted RBP10.27□□□□□ -0.77
IFT20-213ENST00000583796 HCFC1R1Q9NWW0 138 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 IL1RAPL1Q9NZN1 696 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 SLC2A6Q9UGQ3 507 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 GGT7Q9UJ14 662 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 USH1CQ9Y6N9 552 aa10.27□□□□□ -0.77
IFT20-213ENST00000583796 FAM95CA0A1B0GW59 222 aa10.26□□□□□ -0.77
IFT20-213ENST00000583796 H7C0S8 307 aa10.26□□□□□ -0.77
IFT20-213ENST00000583796 GSRP00390 522 aa10.26□□□□□ -0.77
IFT20-213ENST00000583796 PRLP01236 227 aa10.26□□□□□ -0.77
IFT20-213ENST00000583796 PROCP04070 461 aa10.26□□□□□ -0.77
IFT20-213ENST00000583796 C2P06681 752 aa10.26□□□□□ -0.77
IFT20-213ENST00000583796 GJA1P17302 382 aa10.26□□□□□ -0.77
IFT20-213ENST00000583796 LPOP22079 712 aaPredicted RBP10.26□□□□□ -0.77
IFT20-213ENST00000583796 SLC12A2P55011 1212 aa10.26□□□□□ -0.77
IFT20-213ENST00000583796 SNRPD1P62314 119 aaKnown RBP10.26□□□□□ -0.77
IFT20-213ENST00000583796 GALNT3Q14435 633 aa10.26□□□□□ -0.77
IFT20-213ENST00000583796 USP10Q14694 798 aaKnown RBP10.26□□□□□ -0.77
IFT20-213ENST00000583796 RAB30Q15771 203 aa10.26□□□□□ -0.77
IFT20-213ENST00000583796 DUSP6Q16828 381 aa10.26□□□□□ -0.77
IFT20-213ENST00000583796 SLC5A9Q2M3M2 681 aa10.26□□□□□ -0.77
IFT20-213ENST00000583796 TYSND1Q2T9J0 566 aa10.26□□□□□ -0.77
IFT20-213ENST00000583796 ARSIQ5FYB1 569 aa10.26□□□□□ -0.77
IFT20-213ENST00000583796 PITRM1Q5JRX3 1037 aa10.26□□□□□ -0.77
IFT20-213ENST00000583796 AARS2Q5JTZ9 985 aaKnown RBP10.26□□□□□ -0.77
IFT20-213ENST00000583796 CCDC121Q6ZUS5 278 aa10.26□□□□□ -0.77
IFT20-213ENST00000583796 FAM47EQ6ZV65 393 aa10.26□□□□□ -0.77
IFT20-213ENST00000583796 OTOAQ7RTW8 1153 aa10.26□□□□□ -0.77
IFT20-213ENST00000583796 GLT6D1Q7Z4J2 308 aa10.26□□□□□ -0.77
IFT20-213ENST00000583796 SDCCAG8Q86SQ7 713 aaPredicted RBP10.26□□□□□ -0.77
IFT20-213ENST00000583796 DENND6AQ8IWF6 608 aa10.26□□□□□ -0.77
IFT20-213ENST00000583796 CELF5Q8N6W0 485 aaKnown RBP10.26□□□□□ -0.77
IFT20-213ENST00000583796 CCDC63Q8NA47 563 aa10.26□□□□□ -0.77
IFT20-213ENST00000583796 WFDC5Q8TCV5 224 aa10.26□□□□□ -0.77
IFT20-213ENST00000583796 IRF7Q92985 503 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms