RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 FSD1LQ9BXM9 530 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 OSBPL1AQ9BXW6 950 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 OSBPL6Q9BZF3 934 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 FOXQ1Q9C009 403 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 TBC1D17Q9HA65 648 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 XAB2Q9HCS7 855 aaKnown RBP16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 FANCMQ8IYD8 2048 aa16.48■□□□□ 0.23
CDK5RAP3-228ENST00000583363 FRYLO94915 3013 aa16.47■□□□□ 0.23
CDK5RAP3-228ENST00000583363 A0A1W2PQ67 120 aa16.47■□□□□ 0.23
CDK5RAP3-228ENST00000583363 A0A1W2PQF6 199 aa16.47■□□□□ 0.23
CDK5RAP3-228ENST00000583363 CHURC1-FNTBB4DL54 471 aa16.47■□□□□ 0.23
CDK5RAP3-228ENST00000583363 AP3B1O00203 1094 aa16.47■□□□□ 0.23
CDK5RAP3-228ENST00000583363 PRNPP04156 253 aa16.47■□□□□ 0.23
CDK5RAP3-228ENST00000583363 UGT2B4P06133 528 aa16.47■□□□□ 0.23
CDK5RAP3-228ENST00000583363 MYBL2P10244 700 aa16.47■□□□□ 0.23
CDK5RAP3-228ENST00000583363 MAGEA3P43357 314 aa16.47■□□□□ 0.23
CDK5RAP3-228ENST00000583363 MSLNQ13421 630 aaPredicted RBP16.47■□□□□ 0.23
CDK5RAP3-228ENST00000583363 SIRPB2Q5JXA9 342 aa16.47■□□□□ 0.23
CDK5RAP3-228ENST00000583363 KIAA1211LQ6NV74 962 aa16.47■□□□□ 0.23
CDK5RAP3-228ENST00000583363 SLC25A41Q8N5S1 370 aa16.47■□□□□ 0.23
CDK5RAP3-228ENST00000583363 PIH1D2Q8WWB5 315 aa16.47■□□□□ 0.23
CDK5RAP3-228ENST00000583363 KLHL32Q96NJ5 620 aa16.47■□□□□ 0.23
CDK5RAP3-228ENST00000583363 RSPH9Q9H1X1 276 aaPredicted RBP16.47■□□□□ 0.23
CDK5RAP3-228ENST00000583363 CD248Q9HCU0 757 aa16.47■□□□□ 0.23
CDK5RAP3-228ENST00000583363 MTRF1LQ9UGC7 380 aaKnown RBP16.47■□□□□ 0.23
CDK5RAP3-228ENST00000583363 SARDHQ9UL12 918 aa16.47■□□□□ 0.23
CDK5RAP3-228ENST00000583363 MMP17Q9ULZ9 603 aa16.47■□□□□ 0.23
CDK5RAP3-228ENST00000583363 PCDHB9Q9Y5E1 797 aa16.47■□□□□ 0.23
CDK5RAP3-228ENST00000583363 R4GN57 208 aa16.47■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ANKRD66B4E2M5 251 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 AVILO75366 819 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 LMNAP02545 664 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 DCNP07585 359 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 HOXB2P14652 356 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 TPH1P17752 444 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 HLA-DPA1P20036 260 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 CHRNA4P43681 627 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 TNNT3P45378 269 aaPredicted RBP16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 NPY2RP49146 381 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ARL4CP56559 192 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 RPL26P61254 145 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 CDH17Q12864 832 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 STARD3Q14849 445 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 QPCTQ16769 361 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 MSS51Q4VC12 460 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ZNF805Q5CZA5 627 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 PKN3Q6P5Z2 889 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 DSG4Q86SJ6 1040 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ZSWIM9Q86XI8 627 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 DNAAF3Q8N9W5 541 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 OR2T3Q8NH03 318 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 PIP4K2CQ8TBX8 421 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 GRIN3AQ8TCU5 1115 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 PDCD6IPQ8WUM4 868 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 SPOCK2Q92563 424 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 CLDN23Q96B33 292 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 FMO2Q99518 471 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ADGRE3Q9BY15 652 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 TSPYL1Q9H0U9 437 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 DLGAP2Q9P1A6 1054 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 DKK3Q9UBP4 350 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 PHTF1Q9UMS5 762 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 RPL26L1Q9UNX3 145 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 PPIL1Q9Y3C6 166 aa16.46■□□□□ 0.23
CDK5RAP3-228ENST00000583363 ANKRD36A6QL64 1941 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 CACNA1IQ9P0X4 2223 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 TSPAN11A1L157 253 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 SDR42E2A6NKP2 422 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 E7ESA3 106 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 EIF3HO15372 352 aaKnown RBP eCLIP16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 FGF1P05230 155 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 FAM153BP0C7A2 387 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 C7P10643 843 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 TIMP2P16035 220 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 SLC8A1P32418 973 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 COPAP53621 1224 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 GAS6Q14393 721 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 GALNT3Q14435 633 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 HIF1AQ16665 826 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 FAM153CQ494X1 144 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 TMEM92Q6UXU6 159 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 Q6ZS52 159 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 MMAAQ8IVH4 418 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 GSPT2Q8IYD1 628 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 PDIK1LQ8N165 341 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 RMDN1Q96DB5 314 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 ERLEC1Q96DZ1 483 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 SIGLEC10Q96LC7 697 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 PHACTR1Q9C0D0 580 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 SEMA4AQ9H3S1 761 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 FBRSQ9HAH7 460 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 PIH1D1Q9NWS0 290 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 BFARQ9NZS9 450 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 CKAP5Q14008 2032 aa16.45■□□□□ 0.22
CDK5RAP3-228ENST00000583363 DNAH14Q0VDD8 3507 aa16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 C1QTNF3-AMACRE9PGA6 284 aa16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 RNASEH1O60930 286 aaKnown RBP16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 ATG13O75143 517 aa16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 IL1BP01584 269 aa16.44■□□□□ 0.22
CDK5RAP3-228ENST00000583363 MGAT1P26572 445 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms