RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 PRKCSHP14314 528 aaPredicted RBP16.3■□□□□ 0.2
SREBF1-221ENST00000583080 HDAC4P56524 1084 aa16.3■□□□□ 0.2
SREBF1-221ENST00000583080 INPP5AQ14642 412 aa16.3■□□□□ 0.2
SREBF1-221ENST00000583080 VWA3BQ502W6 1294 aa16.3■□□□□ 0.2
SREBF1-221ENST00000583080 TMPRSS9Q7Z410 1059 aa16.3■□□□□ 0.2
SREBF1-221ENST00000583080 ZFAND4Q86XD8 727 aa16.3■□□□□ 0.2
SREBF1-221ENST00000583080 GKN2Q86XP6 184 aa16.3■□□□□ 0.2
SREBF1-221ENST00000583080 PYROXD2Q8N2H3 581 aa16.3■□□□□ 0.2
SREBF1-221ENST00000583080 GPR156Q8NFN8 814 aa16.3■□□□□ 0.2
SREBF1-221ENST00000583080 HMCESQ96FZ2 354 aa16.3■□□□□ 0.2
SREBF1-221ENST00000583080 TMEM74Q96NL1 305 aa16.3■□□□□ 0.2
SREBF1-221ENST00000583080 C11orf70Q9BRQ4 267 aa16.3■□□□□ 0.2
SREBF1-221ENST00000583080 ARHGAP9Q9BRR9 750 aa16.3■□□□□ 0.2
SREBF1-221ENST00000583080 APOOQ9BUR5 198 aa16.3■□□□□ 0.2
SREBF1-221ENST00000583080 PCDH12Q9NPG4 1184 aa16.3■□□□□ 0.2
SREBF1-221ENST00000583080 NOCTQ9UK39 431 aaKnown RBP16.3■□□□□ 0.2
SREBF1-221ENST00000583080 MFHAS1Q9Y4C4 1052 aa16.3■□□□□ 0.2
SREBF1-221ENST00000583080 PCDHGA4Q9Y5G9 962 aa16.3■□□□□ 0.2
SREBF1-221ENST00000583080 UNC13CQ8NB66 2214 aa16.3■□□□□ 0.2
SREBF1-221ENST00000583080 TSPAN11A1L157 253 aa16.29■□□□□ 0.2
SREBF1-221ENST00000583080 ZSCAN5CA6NGD5 496 aaPredicted RBP16.29■□□□□ 0.2
SREBF1-221ENST00000583080 TMX2-CTNND1H3BSU7 103 aa16.29■□□□□ 0.2
SREBF1-221ENST00000583080 NVLO15381 856 aaKnown RBP16.29■□□□□ 0.2
SREBF1-221ENST00000583080 ITGB2P05107 769 aa16.29■□□□□ 0.2
SREBF1-221ENST00000583080 PRKCGP05129 697 aa16.29■□□□□ 0.2
SREBF1-221ENST00000583080 UCHL3P15374 230 aa16.29■□□□□ 0.2
SREBF1-221ENST00000583080 XPAP23025 273 aaPredicted RBP16.29■□□□□ 0.2
SREBF1-221ENST00000583080 HTR1BP28222 390 aa16.29■□□□□ 0.2
SREBF1-221ENST00000583080 PTPN9P43378 593 aa16.29■□□□□ 0.2
SREBF1-221ENST00000583080 CYP4F2P78329 520 aa16.29■□□□□ 0.2
SREBF1-221ENST00000583080 RAD51Q06609 339 aa16.29■□□□□ 0.2
SREBF1-221ENST00000583080 ELP6Q0PNE2 266 aa16.29■□□□□ 0.2
SREBF1-221ENST00000583080 CERCAMQ5T4B2 595 aa16.29■□□□□ 0.2
SREBF1-221ENST00000583080 SPRED1Q7Z699 444 aa16.29■□□□□ 0.2
SREBF1-221ENST00000583080 ZSWIM9Q86XI8 627 aa16.29■□□□□ 0.2
SREBF1-221ENST00000583080 RTL3Q8N8U3 475 aaKnown RBP16.29■□□□□ 0.2
SREBF1-221ENST00000583080 PLA2G15Q8NCC3 412 aa16.29■□□□□ 0.2
SREBF1-221ENST00000583080 FAM172AQ8WUF8 416 aa16.29■□□□□ 0.2
SREBF1-221ENST00000583080 OR1E3Q8WZA6 343 aa16.29■□□□□ 0.2
SREBF1-221ENST00000583080 WDR92Q96MX6 357 aa16.29■□□□□ 0.2
SREBF1-221ENST00000583080 RBM15Q96T37 977 aaKnown RBP eCLIP16.29■□□□□ 0.29e-10■■□□□ 12.5
SREBF1-221ENST00000583080 RETREG1Q9H6L5 497 aa16.29■□□□□ 0.2
SREBF1-221ENST00000583080 FGF22Q9HCT0 170 aa16.29■□□□□ 0.2
SREBF1-221ENST00000583080 TMEM110-MUSTN1A8MSY1 372 aa16.28■□□□□ 0.2
SREBF1-221ENST00000583080 MMP8P22894 467 aa16.28■□□□□ 0.2
SREBF1-221ENST00000583080 MMP12P39900 470 aa16.28■□□□□ 0.2
SREBF1-221ENST00000583080 ZFP36L1Q07352 338 aaKnown RBP16.28■□□□□ 0.2
SREBF1-221ENST00000583080 TPD52L1Q16890 204 aaPredicted RBP16.28■□□□□ 0.2
SREBF1-221ENST00000583080 MANEAQ5SRI9 462 aa16.28■□□□□ 0.2
SREBF1-221ENST00000583080 STRADAQ7RTN6 431 aa16.28■□□□□ 0.2
SREBF1-221ENST00000583080 SLC30A5Q8TAD4 765 aa16.28■□□□□ 0.2
SREBF1-221ENST00000583080 HTR3CQ8WXA8 447 aa16.28■□□□□ 0.2
SREBF1-221ENST00000583080 CENPIQ92674 756 aaPredicted RBP16.28■□□□□ 0.2
SREBF1-221ENST00000583080 NCAPGQ9BPX3 1015 aa16.28■□□□□ 0.2
SREBF1-221ENST00000583080 TUBGCP2Q9BSJ2 902 aa16.28■□□□□ 0.2
SREBF1-221ENST00000583080 MRPL40Q9NQ50 206 aaKnown RBP16.28■□□□□ 0.2
SREBF1-221ENST00000583080 RNF215Q9Y6U7 377 aa16.28■□□□□ 0.2
SREBF1-221ENST00000583080 TMEM202A6NGA9 273 aa16.27■□□□□ 0.2
SREBF1-221ENST00000583080 B4DGG1 531 aa16.27■□□□□ 0.2
SREBF1-221ENST00000583080 C9orf172C9J069 976 aa16.27■□□□□ 0.2
SREBF1-221ENST00000583080 RASA4BC9J798 803 aa16.27■□□□□ 0.2
SREBF1-221ENST00000583080 RASA4O43374 803 aa16.27■□□□□ 0.2
SREBF1-221ENST00000583080 CYP1A1P04798 512 aaPredicted RBP16.27■□□□□ 0.2
SREBF1-221ENST00000583080 CHRNB2P17787 502 aa16.27■□□□□ 0.2
SREBF1-221ENST00000583080 LIG3P49916 1009 aa16.27■□□□□ 0.2
SREBF1-221ENST00000583080 MAPK10P53779 464 aa16.27■□□□□ 0.2
SREBF1-221ENST00000583080 FMO1Q01740 532 aa16.27■□□□□ 0.2
SREBF1-221ENST00000583080 MTM1Q13496 603 aa16.27■□□□□ 0.2
SREBF1-221ENST00000583080 CYTH1Q15438 398 aa16.27■□□□□ 0.2
SREBF1-221ENST00000583080 TBR1Q16650 682 aa16.27■□□□□ 0.2
SREBF1-221ENST00000583080 UGP2Q16851 508 aa16.27■□□□□ 0.2
SREBF1-221ENST00000583080 INO80DQ53TQ3 878 aaPredicted RBP16.27■□□□□ 0.2
SREBF1-221ENST00000583080 ATG14Q6ZNE5 492 aa16.27■□□□□ 0.2
SREBF1-221ENST00000583080 SLITRK4Q8IW52 837 aa16.27■□□□□ 0.2
SREBF1-221ENST00000583080 OR6C4Q8NGE1 309 aa16.27■□□□□ 0.2
SREBF1-221ENST00000583080 CASKIN2Q8WXE0 1202 aa16.27■□□□□ 0.2
SREBF1-221ENST00000583080 USP7Q93009 1102 aa16.27■□□□□ 0.2
SREBF1-221ENST00000583080 NTAN1Q96AB6 310 aa16.27■□□□□ 0.2
SREBF1-221ENST00000583080 FUBP1Q96AE4 644 aaKnown RBP16.27■□□□□ 0.2
SREBF1-221ENST00000583080 APPL1Q9UKG1 709 aa16.27■□□□□ 0.2
SREBF1-221ENST00000583080 DAAM1Q9Y4D1 1078 aa16.27■□□□□ 0.2
SREBF1-221ENST00000583080 DGKBQ9Y6T7 804 aa16.27■□□□□ 0.2
SREBF1-221ENST00000583080 PES1O00541 588 aaKnown RBP16.26■□□□□ 0.19
SREBF1-221ENST00000583080 SUV39H1O43463 412 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 BUB1BO60566 1050 aaPredicted RBP16.26■□□□□ 0.19
SREBF1-221ENST00000583080 GFPT2O94808 682 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 TNFP01375 233 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 GLB1P16278 677 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 EPHB2P29323 1055 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 SUOXP51687 545 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 RALGDSQ12967 914 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 PTP4A2Q12974 167 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 SERINC3Q13530 473 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 HLTFQ14527 1009 aaKnown RBP eCLIP16.26■□□□□ 0.19
SREBF1-221ENST00000583080 C16orf72Q14CZ0 275 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 C14orf28Q4W4Y0 310 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 TAF8Q7Z7C8 310 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 DTX1Q86Y01 620 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 FAM114A1Q8IWE2 563 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 FAM46DQ8NEK8 389 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms