RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 ATP5OP48047 213 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 COPAP53621 1224 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 PMS2P54278 862 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 CREB5Q02930 508 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 SLC10A2Q12908 348 aaPredicted RBP13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 HNRNPDQ14103 355 aaKnown RBP13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 GRM3Q14832 879 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 MORF4L2Q15014 288 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 OASLQ15646 514 aaKnown RBP13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 IZUMO3Q5VZ72 239 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 NPNTQ6UXI9 565 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 TMPRSS6Q8IU80 811 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 STK40Q8N2I9 435 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 RYBPQ8N488 228 aaPredicted RBP13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 MDGA1Q8NFP4 955 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 OR2A12Q8NGT7 310 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 TFB1MQ8WVM0 346 aaKnown RBP13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 MAML1Q92585 1016 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 GATA6Q92908 595 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 LRIG1Q96JA1 1093 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 SPACA7Q96KW9 195 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 MRGPRX1Q96LB2 322 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 PSKH2Q96QS6 385 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 FRMD8Q9BZ67 464 aaPredicted RBP13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 TM6SF2Q9BZW4 377 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 TNKS2Q9H2K2 1166 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 MTG2Q9H4K7 406 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 ZDHHC18Q9NUE0 388 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 GRHL1Q9NZI5 618 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 SHOC2Q9UQ13 582 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 R3HDM2Q9Y2K5 976 aaKnown RBP13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 FAM208BQ5VWN6 2430 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 PLXND1Q9Y4D7 1925 aa13.64□□□□□ -0.23
CSNK1D-220ENST00000581737 RALGAPA1Q6GYQ0 2036 aa13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 SRRM3A6NNA2 597 aaPredicted RBP13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 A6NNZ2 444 aa13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 DNALI1O14645 258 aaPredicted RBP13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 POP4O95707 220 aaKnown RBP13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 IVLP07476 585 aa13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 RBP3P10745 1247 aa13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 PECAM1P16284 738 aaPredicted RBP13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 CCNHP51946 323 aaPredicted RBP13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 RPS14P62263 151 aaKnown RBP13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 GABPB1Q06547 395 aaPredicted RBP13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 ADCY2Q08462 1091 aa13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 NSUN2Q08J23 767 aaKnown RBP eCLIP13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 AP1B1Q10567 949 aa13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 CYTH1Q15438 398 aa13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 CST6Q15828 149 aa13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 TUBB8Q3ZCM7 444 aa13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 USP39Q53GS9 565 aaKnown RBP13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 RALGPS1Q5JS13 557 aa13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 DARS2Q6PI48 645 aaKnown RBP13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 DPY19L3Q6ZPD9 716 aa13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 C11orf74Q86VG3 221 aa13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 FBXO25Q8TCJ0 367 aa13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 PPP1R16AQ96I34 528 aa13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 TTC25Q96NG3 672 aa13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 QKIQ96PU8 341 aaKnown RBP eCLIP13.63□□□□□ -0.238e-9■■■■□ 23.9
CSNK1D-220ENST00000581737 HEPHQ9BQS7 1158 aa13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 OSBPL1AQ9BXW6 950 aa13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 MKRN2Q9H000 416 aaKnown RBP13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 PAK5Q9P286 719 aa13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 HECAQ9UBI9 543 aaPredicted RBP13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 LHX3Q9UBR4 397 aa13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 IL36AQ9UHA7 158 aa13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 TPX2Q9ULW0 747 aaKnown RBP13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 ACTL7AQ9Y615 435 aa13.63□□□□□ -0.23
CSNK1D-220ENST00000581737 DSPP15924 2871 aaKnown RBP13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 BCLAF3A2AJT9 711 aaKnown RBP13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 CDX4O14627 284 aaPredicted RBP13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 ZNF821O75541 412 aaPredicted RBP13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 PEX11BO96011 259 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 IFNB1P01574 187 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 IL1BP01584 269 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 MYZAPP0CAP1 466 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 CCNB1P14635 433 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 C5AR1P21730 350 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 HSD17B3P37058 310 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 PSMD8P48556 350 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 CSNK1DP48730 415 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 ITGA8P53708 1063 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 AP1S1P61966 158 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 IFI35P80217 286 aaPredicted RBP13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 SLC10A7Q0GE19 358 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 CCDC15Q0P6D6 951 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 PRKD1Q15139 912 aaPredicted RBP13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 P3H1Q32P28 736 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 SLC45A4Q5BKX6 768 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 ZDHHC24Q6UX98 284 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 MMAAQ8IVH4 418 aaKnown RBP13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 TEX26Q8N6G2 289 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 TMIEQ8NEW7 156 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 ERLEC1Q96DZ1 483 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 FAM129BQ96TA1 746 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 LGMNQ99538 433 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 CCDC77Q9BR77 488 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 HERPUD2Q9BSE4 406 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 SCNM1Q9BWG6 230 aa13.62□□□□□ -0.23
CSNK1D-220ENST00000581737 PABPC3Q9H361 631 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms