RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 PILRAQ9UKJ1 303 aa12.68□□□□□ -0.38
CSNK1D-218ENST00000581655 HPSEQ9Y251 543 aa12.68□□□□□ -0.38
CSNK1D-218ENST00000581655 DGKBQ9Y6T7 804 aa12.68□□□□□ -0.38
CSNK1D-218ENST00000581655 SHANK1Q9Y566 2161 aa12.68□□□□□ -0.38
CSNK1D-218ENST00000581655 SRGAP2O75044 1071 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 DAB1O75553 588 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 POP4O95707 220 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 GSRP00390 522 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 PCCBP05166 539 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 TIMP2P16035 220 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 TNFRSF8P28908 595 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 CSTF2P33240 577 aaKnown RBP eCLIP12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 ACVRL1P37023 503 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 DCTP40126 519 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 CXCR3P49682 368 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 LIMK2P53671 638 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 TRA2AQ13595 282 aaKnown RBP eCLIP12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 POLD3Q15054 466 aaPredicted RBP12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 MYLK3Q32MK0 819 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 ARTNQ5T4W7 220 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 ATXN7L2Q5T6C5 722 aaPredicted RBP12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 ANKS6Q68DC2 871 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 OLFML1Q6UWY5 402 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 FAM129CQ86XR2 697 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 DRC7Q8IY82 874 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 NRSN1Q8IZ57 195 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 NLGN4XQ8N0W4 816 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 NLGN4YQ8NFZ3 816 aaPredicted RBP12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 STARD8Q92502 1023 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 TSG101Q99816 390 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 EFHD1Q9BUP0 239 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 TMEM168Q9H0V1 697 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 FGF22Q9HCT0 170 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 MRPL40Q9NQ50 206 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 CUEDC1Q9NWM3 386 aaPredicted RBP12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 OCIAD1Q9NX40 245 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 RCOR1Q9UKL0 485 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 CNTN6Q9UQ52 1028 aa12.67□□□□□ -0.38
CSNK1D-218ENST00000581655 ITPR3Q14573 2671 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 TMEM202A6NGA9 273 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 TTLL8A6PVC2 850 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 RHPN2P1A8MT19 583 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 MKRN2OSH3BPM6 223 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 TCN2P20062 427 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 CMA1P23946 247 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 MPSTP25325 297 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 CD1CP29017 333 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 GNA15P30679 374 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 PRCPP42785 496 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 SYKP43405 635 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 PMS1P54277 932 aaKnown RBP12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 MC1RQ01726 317 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 CLPPQ16740 277 aaPredicted RBP12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 TMEM52BQ4KMG9 183 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 DCAF12Q5T6F0 453 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 ANKRD40Q6AI12 368 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 TCTN3Q6NUS6 607 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 LEKR1Q6ZMV7 388 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 C11orf57Q6ZUT1 292 aaPredicted RBP12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 ASB18Q6ZVZ8 466 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 MAMDC2Q7Z304 686 aaPredicted RBP12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 ZNF438Q7Z4V0 828 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 TICAM1Q8IUC6 712 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 CCDC13Q8IYE1 715 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 WDTC1Q8N5D0 677 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 OR56A4Q8NGH8 313 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 KIAA1524Q8TCG1 905 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 ARHGEF2Q92974 986 aaKnown RBP12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 C1orf74Q96LT6 269 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 PHF12Q96QT6 1004 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 NPY6RQ99463 290 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 GTPBP4Q9BZE4 634 aaKnown RBP12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 KCNMB2Q9Y691 235 aa12.66□□□□□ -0.38
CSNK1D-218ENST00000581655 CSMD1Q96PZ7 3565 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 PMM2O15305 246 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 F13A1P00488 732 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 THRAP10827 490 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 XPAP23025 273 aaPredicted RBP12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 MAP4P27816 1152 aaKnown RBP12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 SULT1E1P49888 294 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 RAB15P59190 212 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 DNM1Q05193 864 aaKnown RBP12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 DEUP1Q05D60 604 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 CETN1Q12798 172 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 MTM1Q13496 603 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 NR1D2Q14995 579 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 NKAIN2Q5VXU1 208 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 SLC26A9Q7LBE3 791 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 TIPARPQ7Z3E1 657 aaKnown RBP12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 KDELC2Q7Z4H8 507 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 PASD1Q8IV76 773 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 FAM114A1Q8IWE2 563 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 PLA2G15Q8NCC3 412 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 OR4D9Q8NGE8 314 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 CPT1CQ8TCG5 803 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 SPRY4Q9C004 299 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 ZYG11BQ9C0D3 744 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 SPATS2LQ9NUQ6 558 aaKnown RBP12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 TMEM9Q9P0T7 183 aa12.65□□□□□ -0.38
CSNK1D-218ENST00000581655 MOSPD1Q9UJG1 213 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms