RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 A0A1B0GVT2 93 aa21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 H0Y8X5 98 aa21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 BCAT2O15382 392 aaPredicted RBP21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 AP1G1O43747 822 aa21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 PGLSO95336 258 aa21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 MT-CYBP00156 380 aaPredicted RBP21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 ALPIP09923 528 aa21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 MMP12P39900 470 aa21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 MAPK8P45983 427 aa21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 CSNK1EP49674 416 aaKnown RBP21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 CLDN2P57739 230 aa21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 GRM3Q14832 879 aa21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 PCSK7Q16549 785 aa21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 TEX44Q53QW1 395 aa21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 BRAT1Q6PJG6 821 aa21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 SERAC1Q96JX3 654 aa21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 TDRD1Q9BXT4 1180 aaKnown RBP21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 KDM4CQ9H3R0 1056 aa21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 GLOD4Q9HC38 313 aa21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 CAPN10Q9HC96 672 aa21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 KLHL8Q9P2G9 620 aaPredicted RBP21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 B4GALT6Q9UBX8 382 aa21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 SCN8AQ9UQD0 1980 aa21.85■■□□□ 1.09
CDC42EP4-203ENST00000578516 TDRD6O60522 2096 aaKnown RBP21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 A0A1B0GTW7 788 aa21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 RIOK3O14730 519 aaKnown RBP21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 KCNN4O15554 427 aa21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 SOCS5O75159 536 aa21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 PRLP01236 227 aa21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 FAM193AP78312 1265 aa21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 SIX1Q15475 284 aaPredicted RBP21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 DUOXA1Q1HG43 343 aa21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 DARS2Q6PI48 645 aaKnown RBP21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 BZW1Q7L1Q6 419 aaKnown RBP21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 KDELC2Q7Z4H8 507 aa21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 TSPAN33Q86UF1 283 aa21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 CDKL3Q8IVW4 592 aaPredicted RBP21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 C12orf50Q8NA57 414 aaPredicted RBP21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 LPCAT1Q8NF37 534 aa21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 C1orf54Q8WWF1 131 aa21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 RAB7BQ96AH8 199 aa21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 TEKT5Q96M29 485 aa21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 GORASP1Q9BQQ3 440 aa21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 CARD9Q9H257 536 aa21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 AASDHPPTQ9NRN7 309 aa21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 DNPEPQ9ULA0 475 aa21.84■■□□□ 1.09
CDC42EP4-203ENST00000578516 PIEZO1Q92508 2521 aa21.83■■□□□ 1.09
CDC42EP4-203ENST00000578516 NPIPB15A6NHN6 443 aaPredicted RBP21.83■■□□□ 1.09
CDC42EP4-203ENST00000578516 HACD1B0YJ81 288 aa21.83■■□□□ 1.09
CDC42EP4-203ENST00000578516 KHNYNO15037 678 aaKnown RBP21.83■■□□□ 1.09
CDC42EP4-203ENST00000578516 CEP104O60308 925 aa21.83■■□□□ 1.09
CDC42EP4-203ENST00000578516 FZD6O60353 706 aa21.83■■□□□ 1.09
CDC42EP4-203ENST00000578516 GDF10P55107 478 aa21.83■■□□□ 1.09
CDC42EP4-203ENST00000578516 GRIK2Q13002 908 aa21.83■■□□□ 1.09
CDC42EP4-203ENST00000578516 XRCC4Q13426 336 aa21.83■■□□□ 1.09
CDC42EP4-203ENST00000578516 SNX1Q13596 522 aa21.83■■□□□ 1.09
CDC42EP4-203ENST00000578516 GALNT3Q14435 633 aa21.83■■□□□ 1.09
CDC42EP4-203ENST00000578516 AASDHQ4L235 1098 aaPredicted RBP21.83■■□□□ 1.09
CDC42EP4-203ENST00000578516 ARMC12Q5T9G4 340 aa21.83■■□□□ 1.09
CDC42EP4-203ENST00000578516 SLC35B2Q8TB61 432 aa21.83■■□□□ 1.09
CDC42EP4-203ENST00000578516 CCDC110Q8TBZ0 833 aa21.83■■□□□ 1.09
CDC42EP4-203ENST00000578516 PIH1D2Q8WWB5 315 aa21.83■■□□□ 1.09
CDC42EP4-203ENST00000578516 IMP4Q96G21 291 aaKnown RBP21.83■■□□□ 1.09
CDC42EP4-203ENST00000578516 EDEM2Q9BV94 578 aa21.83■■□□□ 1.09
CDC42EP4-203ENST00000578516 USP29Q9HBJ7 922 aa21.83■■□□□ 1.09
CDC42EP4-203ENST00000578516 AMACRQ9UHK6 382 aa21.83■■□□□ 1.09
CDC42EP4-203ENST00000578516 TSPAN6O43657 245 aa21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 LRP3O75074 770 aa21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 PAK4O96013 591 aaPredicted RBP21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 SERPINF2P08697 491 aa21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 C6P13671 934 aa21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 ENGP17813 658 aa21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 GM2AP17900 193 aa21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 LHCGRP22888 699 aa21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 CCDC15Q0P6D6 951 aa21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 TMEM52BQ4KMG9 183 aa21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 SETMARQ53H47 684 aaPredicted RBP21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 NAPEPLDQ6IQ20 393 aa21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 KIAA1161Q6NSJ0 714 aa21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 SLC23A3Q6PIS1 610 aa21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 GCNT7Q6ZNI0 430 aa21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 PRUNE1Q86TP1 453 aa21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 TAB3Q8N5C8 712 aaPredicted RBP21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 CXorf40AQ8TE69 158 aa21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 OXNAD1Q96HP4 312 aaPredicted RBP21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 MS4A14Q96JA4 679 aa21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 GTPBP2Q9BX10 602 aaKnown RBP21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 SLC6A14Q9UN76 642 aa21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 ASCC3Q8N3C0 2202 aaKnown RBP21.82■■□□□ 1.08
CDC42EP4-203ENST00000578516 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.81■■□□□ 1.08
CDC42EP4-203ENST00000578516 A0A1W2PR77 199 aa21.81■■□□□ 1.08
CDC42EP4-203ENST00000578516 GOLGA6L9A6NEM1 432 aa21.81■■□□□ 1.08
CDC42EP4-203ENST00000578516 FANCGO15287 622 aa21.81■■□□□ 1.08
CDC42EP4-203ENST00000578516 PMPCBO75439 489 aa21.81■■□□□ 1.08
CDC42EP4-203ENST00000578516 GNSP15586 552 aa21.81■■□□□ 1.08
CDC42EP4-203ENST00000578516 LIG3P49916 1009 aa21.81■■□□□ 1.08
CDC42EP4-203ENST00000578516 RPS21P63220 83 aaKnown RBP21.81■■□□□ 1.08
CDC42EP4-203ENST00000578516 OLIG2Q13516 323 aa21.81■■□□□ 1.08
CDC42EP4-203ENST00000578516 CNGA3Q16281 694 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms