RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 CINPQ9BW66 212 aaPredicted RBP8.11□□□□□ -1.11
COPS3-215ENST00000578317 FRMD8Q9BZ67 464 aaPredicted RBP8.11□□□□□ -1.11
COPS3-215ENST00000578317 CIPCQ9C0C6 399 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 TMEM245Q9H330 911 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 NT5MQ9NPB1 228 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 EIF2B3Q9NR50 452 aaKnown RBP8.11□□□□□ -1.11
COPS3-215ENST00000578317 HEBP1Q9NRV9 189 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 FAM114A2Q9NRY5 505 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 THAP10Q9P2Z0 257 aaPredicted RBP8.11□□□□□ -1.11
COPS3-215ENST00000578317 SLCO3A1Q9UIG8 710 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 RAB21Q9UL25 225 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 SLC8A2Q9UPR5 921 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 SNX24Q9Y343 169 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 TRIOO75962 3097 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 GOLGA6CA6NDK9 693 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 GOLGA6BA6NDN3 693 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 WASH3PC4AMC7 463 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 K7EQS6 105 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 K7ERQ8 282 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 INSIG1O15503 277 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 NARSO43776 548 aaKnown RBP8.1□□□□□ -1.11
COPS3-215ENST00000578317 SUN1O94901 812 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 GSRP00390 522 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 RHOXF2BP0C7M4 288 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 GOLGA6DP0CG33 693 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 TPSB2P20231 275 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 KIR2DL1P43626 348 aaPredicted RBP8.1□□□□□ -1.11
COPS3-215ENST00000578317 RPL21P46778 160 aaKnown RBP8.1□□□□□ -1.11
COPS3-215ENST00000578317 SOX9P48436 509 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 ST8SIA6P61647 398 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 SNRPD1P62314 119 aaKnown RBP8.1□□□□□ -1.11
COPS3-215ENST00000578317 NIPAL4Q0D2K0 466 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 SPEM2Q0P670 501 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 GRSF1Q12849 480 aaKnown RBP eCLIP8.1□□□□□ -1.11
COPS3-215ENST00000578317 CALCOCO2Q13137 446 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 MPP3Q13368 585 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 GRM3Q14832 879 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 TPSAB1Q15661 275 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 RNASEH2BQ5TBB1 312 aaKnown RBP8.1□□□□□ -1.11
COPS3-215ENST00000578317 NAIF1Q69YI7 327 aaPredicted RBP8.1□□□□□ -1.11
COPS3-215ENST00000578317 HIBCHQ6NVY1 386 aaPredicted RBP8.1□□□□□ -1.11
COPS3-215ENST00000578317 CCNI2Q6ZMN8 369 aaPredicted RBP8.1□□□□□ -1.11
COPS3-215ENST00000578317 LEKR1Q6ZMV7 388 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 PRPF39Q86UA1 669 aaKnown RBP8.1□□□□□ -1.11
COPS3-215ENST00000578317 PPIL6Q8IXY8 311 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 NAT8LQ8N9F0 302 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 CPT1BQ92523 772 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 ART4Q93070 314 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 SEC16BQ96JE7 1060 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 RPL10LQ96L21 214 aaKnown RBP8.1□□□□□ -1.11
COPS3-215ENST00000578317 NELL2Q99435 816 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 RHOXF2Q9BQY4 288 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 CEP41Q9BYV8 373 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 CPEB1Q9BZB8 566 aaKnown RBP8.1□□□□□ -1.11
COPS3-215ENST00000578317 FOXP3Q9BZS1 431 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 TSPYL1Q9H0U9 437 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 ARNT2Q9HBZ2 717 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 GOLGA6AQ9NYA3 693 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 GRHL1Q9NZI5 618 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 LHX3Q9UBR4 397 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 SUN2Q9UH99 717 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 FAM153AQ9UHL3 310 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 RSPH14Q9UHP6 348 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 ACTL7AQ9Y615 435 aa8.1□□□□□ -1.11
COPS3-215ENST00000578317 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.09□□□□□ -1.11
COPS3-215ENST00000578317 LOC285095A0A1B0GVY8 99 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 AP3B1O00203 1094 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 POP4O95707 220 aaKnown RBP8.09□□□□□ -1.11
COPS3-215ENST00000578317 AP2A1O95782 977 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 APRTP07741 180 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 MMP2P08253 660 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 SERPINF2P08697 491 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 PSMB4P28070 264 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 VPS41P49754 854 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 STK19P49842 368 aaPredicted RBP8.09□□□□□ -1.11
COPS3-215ENST00000578317 GEMP55040 296 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 STARD6P59095 220 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 RHOAP61586 193 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 AP1S1P61966 158 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 MRPS21P82921 87 aaKnown RBP8.09□□□□□ -1.11
COPS3-215ENST00000578317 SARNPP82979 210 aaKnown RBP8.09□□□□□ -1.11
COPS3-215ENST00000578317 IHHQ14623 411 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 KCNJ11Q14654 390 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 TRADDQ15628 312 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 MLF2Q15773 248 aaPredicted RBP8.09□□□□□ -1.11
COPS3-215ENST00000578317 MYLK3Q32MK0 819 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 HNRNPA1L2Q32P51 320 aaKnown RBP8.09□□□□□ -1.11
COPS3-215ENST00000578317 HSF5Q4G112 596 aaPredicted RBP8.09□□□□□ -1.11
COPS3-215ENST00000578317 CARD16Q5EG05 197 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 LCE2CQ5TA81 110 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 ARMC3Q5W041 872 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 NCEH1Q6PIU2 408 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 RANBP10Q6VN20 620 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 ZNF852Q6ZMS4 543 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 SYNPOQ8N3V7 929 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 OR2AP1Q8NGE2 309 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 OR2A12Q8NGT7 310 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 USP33Q8TEY7 942 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 CYB5D2Q8WUJ1 264 aa8.09□□□□□ -1.11
COPS3-215ENST00000578317 SORCS1Q8WY21 1168 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms