RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 STAT4Q14765 748 aa13.99□□□□□ -0.17
SNORD3B-1-201ENST00000577988 CCDC6Q16204 474 aa13.99□□□□□ -0.17
SNORD3B-1-201ENST00000577988 AASDHQ4L235 1098 aaPredicted RBP13.99□□□□□ -0.17
SNORD3B-1-201ENST00000577988 AADACL2Q6P093 401 aa13.99□□□□□ -0.17
SNORD3B-1-201ENST00000577988 KIAA2013Q8IYS2 634 aa13.99□□□□□ -0.17
SNORD3B-1-201ENST00000577988 DENND6BQ8NEG7 585 aa13.99□□□□□ -0.17
SNORD3B-1-201ENST00000577988 CXorf40AQ8TE69 158 aa13.99□□□□□ -0.17
SNORD3B-1-201ENST00000577988 IMP4Q96G21 291 aaKnown RBP13.99□□□□□ -0.17
SNORD3B-1-201ENST00000577988 SERAC1Q96JX3 654 aa13.99□□□□□ -0.17
SNORD3B-1-201ENST00000577988 NSMCE3Q96MG7 304 aa13.99□□□□□ -0.17
SNORD3B-1-201ENST00000577988 HERPUD2Q9BSE4 406 aa13.99□□□□□ -0.17
SNORD3B-1-201ENST00000577988 TLR10Q9BXR5 811 aa13.99□□□□□ -0.17
SNORD3B-1-201ENST00000577988 EBF2Q9HAK2 575 aa13.99□□□□□ -0.17
SNORD3B-1-201ENST00000577988 GLOD4Q9HC38 313 aa13.99□□□□□ -0.17
SNORD3B-1-201ENST00000577988 PCDH12Q9NPG4 1184 aa13.99□□□□□ -0.17
SNORD3B-1-201ENST00000577988 SEPT10Q9P0V9 454 aa13.99□□□□□ -0.17
SNORD3B-1-201ENST00000577988 DNPEPQ9ULA0 475 aa13.99□□□□□ -0.17
SNORD3B-1-201ENST00000577988 TTLL3Q9Y4R7 772 aa13.99□□□□□ -0.17
SNORD3B-1-201ENST00000577988 PCDHB9Q9Y5E1 797 aa13.99□□□□□ -0.17
SNORD3B-1-201ENST00000577988 RAI2Q9Y5P3 530 aa13.99□□□□□ -0.17
SNORD3B-1-201ENST00000577988 ATXN2Q99700 1313 aaKnown RBP13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 PATE3B3GLJ2 98 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 KCNK3O14649 394 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 TOR1BO14657 336 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 SPINT1O43278 529 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 KIF5CO60282 957 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 FZD6O60353 706 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 DFNA5O60443 496 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 CPP00450 1065 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 CYP2A6P11509 494 aaPredicted RBP13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 CD38P28907 300 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 MAT2AP31153 395 aaKnown RBP13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 MMP12P39900 470 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 NIPAL4Q0D2K0 466 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 WASHC5Q12768 1159 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 AGERQ15109 404 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 SF3A2Q15428 464 aaKnown RBP13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 DARS2Q6PI48 645 aaKnown RBP13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 USP45Q70EL2 814 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 DPPA4Q7L190 304 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 PID1Q7Z2X4 250 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 ADAT2Q7Z6V5 191 aaKnown RBP13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 ZSWIM9Q86XI8 627 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 SLC13A5Q86YT5 568 aaPredicted RBP13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 DCP2Q8IU60 420 aaKnown RBP13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 RAVER1Q8IY67 606 aaKnown RBP13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 NETO1Q8TDF5 533 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 LRRN4Q8WUT4 740 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 SCRN2Q96FV2 425 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 AGAP3Q96P47 875 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 PPP1R2P1Q96PQ5 205 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 TDRD1Q9BXT4 1180 aaKnown RBP13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 AASDHPPTQ9NRN7 309 aa13.98□□□□□ -0.17
SNORD3B-1-201ENST00000577988 PLXNA2O75051 1894 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 A0A1W2PR77 199 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 LNP1A1A4G5 178 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 TTC24A2A3L6 582 aaPredicted RBP13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 IGLON5A6NGN9 336 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 PSMD11O00231 422 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 SLC31A1O15431 190 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 PAK4O96013 591 aaPredicted RBP13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 MMP2P08253 660 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 ENGP17813 658 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 RBL1P28749 1068 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 STIP1P31948 543 aaKnown RBP13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 CSNK1EP49674 416 aaKnown RBP13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 ATXN3P54252 364 aaPredicted RBP13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 EPHB1P54762 984 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 C21orf59P57076 290 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 FAM193AP78312 1265 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 SKOR1P84550 965 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 SEL1L3Q68CR1 1132 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 ITPRIPL1Q6GPH6 555 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 TMEM145Q8NBT3 493 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 SLC35B2Q8TB61 432 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 PDCD6IPQ8WUM4 868 aaKnown RBP13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 PIH1D2Q8WWB5 315 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 TADA1Q96BN2 335 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 PBKQ96KB5 322 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 FCRL5Q96RD9 977 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 MCCC1Q96RQ3 725 aaPredicted RBP13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 SRPK1Q96SB4 655 aaKnown RBP13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 EDEM2Q9BV94 578 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 ADGRE3Q9BY15 652 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 PCDH9Q9HC56 1237 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 TMEM9BQ9NQ34 198 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 KLHL8Q9P2G9 620 aaPredicted RBP13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 ZKSCAN5Q9Y2L8 839 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 LRRK1Q38SD2 2015 aa13.97□□□□□ -0.17
SNORD3B-1-201ENST00000577988 ASCC3Q8N3C0 2202 aaKnown RBP13.96□□□□□ -0.17
SNORD3B-1-201ENST00000577988 PCDH15Q96QU1 1955 aa13.96□□□□□ -0.17
SNORD3B-1-201ENST00000577988 ADAMTS9Q9P2N4 1935 aa13.96□□□□□ -0.17
SNORD3B-1-201ENST00000577988 MMP20O60882 483 aa13.96□□□□□ -0.17
SNORD3B-1-201ENST00000577988 GJB3O75712 270 aa13.96□□□□□ -0.17
SNORD3B-1-201ENST00000577988 CER1O95813 267 aa13.96□□□□□ -0.17
SNORD3B-1-201ENST00000577988 PRLP01236 227 aa13.96□□□□□ -0.17
SNORD3B-1-201ENST00000577988 EPOP01588 193 aa13.96□□□□□ -0.17
SNORD3B-1-201ENST00000577988 VIPR1P32241 457 aa13.96□□□□□ -0.17
SNORD3B-1-201ENST00000577988 CD86P42081 329 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms