RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 ETNK1Q9HBU6 452 aa11.25□□□□□ -0.61
CDK5RAP3-204ENST00000577664 NOD2Q9HC29 1040 aa11.25□□□□□ -0.61
CDK5RAP3-204ENST00000577664 NT5MQ9NPB1 228 aa11.25□□□□□ -0.61
CDK5RAP3-204ENST00000577664 PRSS16Q9NQE7 514 aa11.25□□□□□ -0.61
CDK5RAP3-204ENST00000577664 WHRNQ9P202 907 aa11.25□□□□□ -0.61
CDK5RAP3-204ENST00000577664 FAM153AQ9UHL3 310 aa11.25□□□□□ -0.61
CDK5RAP3-204ENST00000577664 PPM1HQ9ULR3 514 aa11.25□□□□□ -0.61
CDK5RAP3-204ENST00000577664 UTP11Q9Y3A2 253 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-204ENST00000577664 FARP1Q9Y4F1 1045 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-204ENST00000577664 PCNX2A6NKB5 2137 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 APC2O95996 2303 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 A0A1W2PQF6 199 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 ANTXRLA6NF34 631 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 DNALI1O14645 258 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 ATG13O75143 517 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 AP2A1O95782 977 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 IGSF6O95976 241 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SERPINF2P08697 491 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 NFKB1P19838 968 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 TPSB2P20231 275 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 TIE1P35590 1138 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 MPLP40238 635 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 GEMP55040 296 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 RPL26P61254 145 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 RAD51Q06609 339 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 PRPSAP1Q14558 356 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 ELAVL3Q14576 367 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 KCNJ11Q14654 390 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 PPP1R7Q15435 360 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 TPSAB1Q15661 275 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 ACCSLQ4AC99 568 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 FNDC3BQ53EP0 1204 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 EOGTQ5NDL2 527 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 RNASEH2BQ5TBB1 312 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SDE2Q6IQ49 451 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 HIBCHQ6NVY1 386 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 C8orf74Q6P047 294 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 KDELC1Q6UW63 502 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SERPINA13PQ6UXR4 307 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 ARHGEF18Q6ZSZ5 1173 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SYT13Q7L8C5 426 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 PRUNE1Q86TP1 453 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 LRRN4CLQ8ND94 238 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 CPT1BQ92523 772 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 FAM131CQ96AQ9 280 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 OXNAD1Q96HP4 312 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SEMA3CQ99985 751 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 HEPHQ9BQS7 1158 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 OSBPL1AQ9BXW6 950 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 RSPH9Q9H1X1 276 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 GDF3Q9NR23 364 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SEPT10Q9P0V9 454 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 HECAQ9UBI9 543 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 DKK3Q9UBP4 350 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 RSPH14Q9UHP6 348 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 DMGDHQ9UI17 866 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 TPX2Q9ULW0 747 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 MMP17Q9ULZ9 603 aa11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 RPL26L1Q9UNX3 145 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-204ENST00000577664 CKAP5Q14008 2032 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 TSPAN11A1L157 253 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 GOLGA6CA6NDK9 693 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 GOLGA6BA6NDN3 693 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 AP3B1O00203 1094 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 RNF40O75150 1001 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SEC31AO94979 1220 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 PRLP01236 227 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 PRB1P04280 392 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 TUBBP07437 444 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 GOLGA6DP0CG33 693 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 MLNP12872 115 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 PRKCHP24723 683 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 PSMB4P28070 264 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 ADCY8P40145 1251 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SCNN1BP51168 640 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 CCNHP51946 323 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 MAXP61244 160 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 DSC2Q02487 901 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 CAV1Q03135 178 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 GPS1Q13098 491 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 MSLNQ13421 630 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 MORF4L2Q15014 288 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 CCDC70Q6NSX1 233 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 Q6ZVU0 165 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 PPIL6Q8IXY8 311 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 CHPFQ8IZ52 775 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 GAB3Q8WWW8 586 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.23□□□□□ -0.614e-10■□□□□ 9.4
CDK5RAP3-204ENST00000577664 ART4Q93070 314 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SNF8Q96H20 258 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 FEM1CQ96JP0 617 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 ZC3H10Q96K80 434 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 MRGPRX2Q96LB1 330 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 TRIB3Q96RU7 358 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 UBL7Q96S82 380 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 C19orf43Q9BQ61 176 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 MLPHQ9BV36 600 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 CEP41Q9BYV8 373 aa11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 FRMD8Q9BZ67 464 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-204ENST00000577664 SMOC1Q9H4F8 434 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms